hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07072/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0383  ( 211 res)   mbg07072

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
H15      Domain in histone families 1 and 5              57.0    2.4e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
H15        1/1      46   123 ..     1    70 []    57.0  2.4e-12

Alignments of top-scoring domains:
H15: domain 1 of 1, from 46 to 123: score 57.0, E = 2.4e-12
                   *->pasHPpyse........MIteAItaLKERkGSSlqAIkKYIeanhyk
                      ++ +Pp+ + ++ + ++++++AI++L E++GSSl+ I KY+ ++  +
   mKIAA0383    46    GSKGPPCNDlrnvdwnkLLKRAIEGLEEPNGSSLKNIEKYLRSQ-SD 91   

                   vlpnnnk..frklLklaLkklVasGkLvqvKGs<-*
                   +  ++n++ f+++L+l  k++V++G+L++  G+   
   mKIAA0383    92 LTGTTNHpaFQQRLRLGAKRAVNNGRLLK-EGP    123  

//