hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj03079/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0380  ( 653 res)   mfj03079

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     34.8    1.1e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      97   212 ..     1    82 []    34.8  1.1e-05

Alignments of top-scoring domains:
PH: domain 1 of 1, from 97 to 212: score 34.8, E = 1.1e-05
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk.............
                      +i+eG L+++ +k++  +  + L ++ +++ +  +++   + ++++ 
   mKIAA0380    97    MIHEGPLTWRIsKdKTLDLQVLLLEDLVVLLQRQeeklllkchskta 143  

                   ........kpkgsipLsgcsvre.p.....cFeivt.dr....tlllqAe
                    ++++++++ ++++ L+ + +r  + +++  F i+t++ ++++ ++l A 
   mKIAA0380   144 vgssdskqTFSPVLKLNAVLIRSvAtdkraFFIICTsELgppqIYELVAL 193  

                   seeereeWvealqsaiaka<-*
                   ++++++ W+e l++a+++a   
   mKIAA0380   194 TSSDKNIWMELLEEAVQNA    212  

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