hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06816/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0365  ( 370 res)   mbg06816

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Surp     Surp module                                     42.6    9.1e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Surp       1/1     170   213 ..     1    47 []    42.6  9.1e-09

Alignments of top-scoring domains:
Surp: domain 1 of 1, from 170 to 213: score 42.6, E = 9.1e-09
                   *->IkltAqfVakgGlefeakllerernndprFdFLnpsndpyhkYYrkk
                      I++++++V++g l++++++l  +   dp+++FL+++ ++++kYY++k
   mKIAA0365   170    IDQLVMRVIQGRLSPRERTLLLQ---DPAYWFLSDESSLEYKYYKLK 213  

                   <-*
                      
   mKIAA0365     -     -    

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