hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06791/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0359  ( 757 res)   mbg06791

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
KISc     Kinesin motor, catalytic domain. ATPase.       632.3   1.6e-185   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
KISc       1/1      17   358 ..     1   404 []   632.3 1.6e-185

Alignments of top-scoring domains:
KISc: domain 1 of 1, from 17 to 358: score 632.3, E = 1.6e-185
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv.....tvtvn..
                       +++rV+vR+   RP n++Ek+       + vv+v+ + ++v+v ++
   mKIAA0359    17    SESVRVVVRC---RPMNGKEKAAS----YDKVVDVdvklgQVSVKnp 56   

                   ..........FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNv
                   ++++++ +++FtFD V+      d++a Q + ++e+ +PLvds+l+G+N+
   mKIAA0359    57 kgtshempktFTFDAVY------DWNAKQFELYDETFRPLVDSVLQGFNG 100  

                   aTIFAYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlF
                    TIFAYGQTG+GKTyTM+G              ++p+ +G+IP +++++F
   mKIAA0359   101 -TIFAYGQTGTGKTYTMEGVR------------GDPEKRGVIPNSFDHIF 137  

                   ekide.....fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkk
                   ++i ++++++++V++SylEIY+E+irDLLs++++              k+
   mKIAA0359   138 THISRsqnqqYLVRASYLEIYQEEIRDLLSKDQT--------------KR 173  

                   LrirEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGn
                   L+++E ++                gvyV++L+ ++ +S+ e+++++++Gn
   mKIAA0359   174 LELKERPD---------------TGVYVKDLSSFVTKSVKEIEHVMNVGN 208  

                   knRtvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstnegteqi
                   +nR+v+aT+mNe+SSRSHaiF it+e  e++             +g+  i
   mKIAA0359   209 QNRSVGATNMNEHSSRSHAIFVITIECSEVG------------LDGENHI 246  

                   ksskLnLVDLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALad
                   +++kLnLVDLAGSER++kTg  a G+RLkEa++IN+SL+aLGnVI+AL+d
   mKIAA0359   247 RVGKLNLVDLAGSERQAKTG--AQGERLKEATKINLSLSALGNVISALVD 294  

                   dshdsaeseatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSP
                                  gks+HIPYRDSKLTrLLQdSLGGN+KT+M+anv P
   mKIAA0359   295 ---------------GKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGP 329  

                   sssnyeETlsTLrFAsRaksIknkpavne<-*
                   +s+n+eETl+TLr+A+Rak+Iknkp vne   
   mKIAA0359   330 ASYNVEETLTTLRYANRAKNIKNKPRVNE    358  

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