hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06791/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0359  ( 757 res)   mbg06791

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Kinesin  Kinesin motor domain                           618.2   4.7e-182   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Kinesin    1/1      25   351 ..     1   424 []   618.2 4.7e-182

Alignments of top-scoring domains:
Kinesin: domain 1 of 1, from 25 to 351: score 618.2, E = 4.7e-182
                   *->RvRPlnerEksrgs.vvvnv.....sedvessrltn.gkkktFtFDk
                      R+RP+n++Ek+++ ++vv+v+ + + ++v++ + t+++++ktFtFD+
   mKIAA0359    25    RCRPMNGKEKAASYdKVVDVdvklgQVSVKNPKGTShEMPKTFTFDA 71   

                   VFdpeatQegssepYAsqefvyesvakPlvesvleGyNgtiFAYGQTGSG
                   V+d +a           q ++y+++ +Plv+svl+G+NgtiFAYGQTG+G
   mKIAA0359    72 VYDWNAK----------QFELYDETFRPLVDSVLQGFNGTIFAYGQTGTG 111  

                   KTYTMeGppesdkesgnptddsytlpeeepGiiPRaledlFerieerker
                   KTYTMeG ++               ++e +G+iP +++++F++i++ +  
   mKIAA0359   112 KTYTMEGVRG---------------DPEKRGVIPNSFDHIFTHISRSQ-- 144  

                   kpvfKPklnekgwellnsqetligvsfdrglssdlyvndlefsvkvSylE
                                                         + +++v++SylE
   mKIAA0359   145 --------------------------------------NQQYLVRASYLE 156  

                   IYNEkirDLLspsppqrgspskanekkkkkpLrireDpkrGgkmdgvyVe
                   IY+E+irDLLs++             ++k  L+++e p++G     vyV+
   mKIAA0359   157 IYQEEIRDLLSKD-------------QTKR-LELKERPDTG-----VYVK 187  

                   GLteveVssaeevlelLelGnknRtvasTkmNerSSRSHaiFtitveqrn
                   +L++++ +s+ e+ +++++Gn+nR+v++T+mNe+SSRSHaiF it+e ++
   mKIAA0359   188 DLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSE 237  

                   tdstgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkE
                    +           +ge+++rv+kLnLVDLAGSER++kTg   A+g+RLkE
   mKIAA0359   238 VG----------LDGENHIRVGKLNLVDLAGSERQAKTG---AQGERLKE 274  

                   aanINkSLsaLGnVInALadkqkssHiPYRDSKLTrLLqDSLGGGDNsKT
                   a++IN SLsaLGnVI+AL+d+ ks+HiPYRDSKLTrLLqDSLGG  N+KT
   mKIAA0359   275 ATKINLSLSALGNVISALVDG-KSTHIPYRDSKLTRLLQDSLGG--NAKT 321  

                   lMIaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +M+an+ P+s+    n+eETL TLr+A+RAKnIk   
   mKIAA0359   322 VMVANVGPASY----NVEETLTTLRYANRAKNIK    351  

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