hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg19003/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0322  ( 1177 res)   mbg19003

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   631.1   3.8e-185   1
WW                                                       96.4    3.4e-24   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WW         1/2     400   432 ..     1    34 []    57.8  1.4e-12
WW         2/2     590   622 ..     1    34 []    38.5    9e-07
HECTc      1/1     840  1177 .]     1   407 []   631.1 3.8e-185

Alignments of top-scoring domains:
WW: domain 1 of 2, from 400 to 432: score 57.8, E = 1.4e-12
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                      plPp+We+r+d   Gr++Y++h++++t+W++P +   
   mKIAA0322   400    PLPPNWEARIDSH-GRVFYVDHINRTTTWQRPSM    432  

WW: domain 2 of 2, from 590 to 622: score 38.5, E = 9e-07
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                       lP gWe  +d + G+ ++++h+++ t++ +Pr    
   mKIAA0322   590    ELPRGWEIKTDHQ-GKSFFVDHNSRATTFIDPRI    622  

HECTc: domain 1 of 1, from 840 to 1177: score 631.1, E = 3.8e-185
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      ++s ++L++++   L+I+f      vgEeglD++G++rEFfflls+e
   mKIAA0322   840    AYSRKELQRNK---LYITF------VGEEGLDYSGPSREFFFLLSQE 877  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   lfnp +ygLF+ys+nd+            ++    ++sa+++n ++    
   mKIAA0322   878 LFNP-YYGLFEYSANDT------------YTVQISPMSAFVENYLE---- 910  

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   +Frf Gr+lG+Al++++llD++F+rpFyK LL++p    ++l+Dle+lD 
   mKIAA0322   911 WFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLP----CDLSDLEYLDE 956  

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                   e+++sL+w+                   ++n+it++ ld  LtF++++e 
   mKIAA0322   957 EFHQSLQWM-------------------KDNNITDI-LD--LTFTVNEEV 984  

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    fg+v+++ELk GG+n++VTe+NkkEY+++++ +r ++gv +q+eA+++G
   mKIAA0322   985 -FGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALLRG 1033 

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F+eV++ +l + +Fd++ELeL i+G++ eid++d+++nTeyrggY++++ 
   mKIAA0322  1034 FYEVVDSRLVS-VFDARELELVIAGTA-EIDLNDWRNNTEYRGGYHDGHL 1081 

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   +i   +wFW +ve+F+ne+r +LLqFVTG+s++P  ++GFaaL++sNG++
   mKIAA0322  1082 VI---RWFWAAVERFNNEQRLRLLQFVTGTSSVP--YEGFAALRGSNGLR 1126 

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                   +F+I+k+g     + ++LP+AhTCfNrL+LPpY S+++L+eKLL+A++e 
   mKIAA0322  1127 RFCIEKWG-----KITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEE- 1170 

                   RiggeGFgls<-*
                      +  Fgl+   
   mKIAA0322  1171 ---TSTFGLE    1177 

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