hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg19003/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0322  ( 1177 res)   mbg19003

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECT     HECT-domain (ubiquitin-transferase)            577.6   7.7e-170   1
WW       WW domain                                      100.6    3.1e-26   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WW         1/2     401   430 ..     1    30 []    59.5  7.1e-14
WW         2/2     591   620 ..     1    30 []    41.2  2.3e-08
HECT       1/1     872  1177 .]     1   366 []   577.6 7.7e-170

Alignments of top-scoring domains:
WW: domain 1 of 2, from 401 to 430: score 59.5, E = 7.1e-14
                   *->LppgWeerkdpdGrpYYyNhnTktTqWekP<-*
                      Lpp+We+r+d++Gr++Y++h+++tT+W++P   
   mKIAA0322   401    LPPNWEARIDSHGRVFYVDHINRTTTWQRP    430  

WW: domain 2 of 2, from 591 to 620: score 41.2, E = 2.3e-08
                   *->LppgWeerkdpdGrpYYyNhnTktTqWekP<-*
                      Lp gWe  +d +G+ ++++hn++ T++++P   
   mKIAA0322   591    LPRGWEIKTDHQGKSFFVDHNSRATTFIDP    620  

HECT: domain 1 of 1, from 872 to 1177: score 577.6, E = 7.7e-170
                   *->tLlsrelfnPdygLFeysdnseakseeddsysgyvedsytlfpnPls
                      +Lls+elfnP+ygLFeys                ++d+yt +++P s
   mKIAA0322   872    FLLSQELFNPYYGLFEYS----------------ANDTYTVQISPMS 902  

                   gesnpehervlkyFkflGrilGlAlydgrllDlpFsraFyKklLmagkps
                    +  ++    l++F+f GrilGlAl ++ llD++F+r+FyK lL  ++p 
   mKIAA0322   903 AF-VENY---LEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLL--KLP- 945  

                   igivtleDlesvDPelynSLkwllendgdKkIedsLLgsledveedLeLt
                      ++l+Dle +D e+++SL+w+++n+++               ++L+Lt
   mKIAA0322   946 ---CDLSDLEYLDEEFHQSLQWMKDNNIT---------------DILDLT 977  

                   FsveeessvgfeadarffGgtktveELkPnGrnipVTneNkeeYvelyvd
                   F+v ee+   f       G+++++e Lk +G+n+ VT++Nk+eY+e++v 
   mKIAA0322   978 FTVNEEV---F-------GQVTERE-LKSGGANTQVTEKNKKEYIERMVK 1016 

                   yrLnkgiekQfeAFrkGFsevipsrlLslFdpeELelLicGspeeiDvdd
                   +r+ +g+ +Q+eA+++GF+ev++srl+s+Fd++ELel+i G   eiD++d
   mKIAA0322  1017 WRVERGVVQQTEALLRGFYEVVDSRLVSVFDARELELVIAGTA-EIDLND 1065 

                   LkenTeYdggYtedsplktiqwFWevleeftneeraklLqFvTGssRlPv
                   +++nTeY+ggY++ +   +i+wFW ++e f+ne+r +lLqFvTG+s++P 
   mKIAA0322  1066 WRNNTEYRGGYHDGHL--VIRWFWAAVERFNNEQRLRLLQFVTGTSSVPY 1113 

                   gGFkaLqgGsnGpPkFtIvrkegggdddrLPtAhTCFNrLkLPpYsSkei
                   +GF+aL+ GsnG+++F+I+++   g+ ++LP+AhTCFNrL+LPpY+S+  
   mKIAA0322  1114 EGFAALR-GSNGLRRFCIEKW---GKITSLPRAHTCFNRLDLPPYPSYSM 1159 

                   LrekLllAInEgseGFgle<-*
                   L+ekLl+A+ E++  Fgle   
   mKIAA0322  1160 LYEKLLTAV-EETSTFGLE    1177 

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