hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01292/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0320  ( 1471 res)   mbg01292

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ILWEQ    I/LWEQ domain                                  313.8    1.2e-89   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ILWEQ      1/1    1251  1462 ..     1   207 []   313.8  1.2e-89

Alignments of top-scoring domains:
ILWEQ: domain 1 of 1, from 1251 to 1462: score 313.8, E = 1.2e-89
                   *->gveleVdEsILeaAkaItkAiaaLVkAAtnaQrEIVaqGrggaspae
                      ++ l+++E+ILeaAk+I++A++aLVk+A++aQrE+VaqG++g++pa+
   mKIAA0320  1251    DETLDFEEQILEAAKSIAAATSALVKSASAAQRELVAQGKVGSIPAN 1297 

                   fYkKnsrWTEGLISAAKAVAaAtnvLveaAdgvvqGkgseEeLIVAakeV
                   + + +++W++GLISAA++VAaAt  L+eaA+++vqG++seE+LI++ak+V
   mKIAA0320  1298 AAD-DGQWSQGLISAARMVAAATSSLCEAANASVQGHASEEKLISSAKQV 1346 

                   AASTAQLVaASRVKAdkdSqSqAaqdrLe...............aAskaV
                   AASTAQL++A++VKAd+dS+   a++rL+   ++ +++    ++aA++aV
   mKIAA0320  1347 AASTAQLLVACKVKADQDSE---AMKRLQvmvtdaggkilllerAAGNAV 1393 

                   tnAtanLVaavksvaieddeetieqeqelDfskLslhegKtqEMEqQVeI
                   ++A++nLV+a++++a  +    +++++ ++ +  ++++g++q++++Q+e+
   mKIAA0320  1394 KRASDNLVRAAQKAAFGK----ADDDDVVVKT--KFVGGIAQIIAAQEEM 1437 

                   LKLEkeLeaARkkLaeiRKqeYkla<-*
                   LK+E+eLe+ARkkLa+iR+q+Yk+    
   mKIAA0320  1438 LKKERELEEARKKLAQIRQQQYKFL    1462 

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