hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01292/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0320  ( 1471 res)   mbg01292

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
I_LWEQ   I/LWEQ domain                                  321.8      8e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
I_LWEQ     1/1    1256  1462 ..     1   202 []   321.8    8e-93

Alignments of top-scoring domains:
I_LWEQ: domain 1 of 1, from 1256 to 1462: score 321.8, E = 8e-93
                   *->VnesILsaakaImkAiaaLVkAAsaaQrEivaqGrgsaspaefYkkn
                      ++e+IL+aak+I++A++aLVk+AsaaQrE+vaqG+++++pa++ + +
   mKIAA0320  1256    FEEQILEAAKSIAAATSALVKSASAAQRELVAQGKVGSIPANAAD-D 1301 

                   srWTEGLISAAKaVgaAttvLvEAAdkvVtsEDnGkgsfEeLIVaakeVA
                   ++W++GLISAA++V+aAt  L+EAA+++V+    G++s+E+LI++ak+VA
   mKIAA0320  1302 GQWSQGLISAARMVAAATSSLCEAANASVQ----GHASEEKLISSAKQVA 1347 

                   ASTAQLVaASrVKAGDDkdSkaAldrLq...............aAakaVn
                   ASTAQL++A++VKA  D+dS+a ++rLq   ++ +++    ++aA++aV+
   mKIAA0320  1348 ASTAQLLVACKVKA--DQDSEA-MKRLQvmvtdaggkilllerAAGNAVK 1394 

                   eAtanLVaaaksgaifdiedqqeedfsslslhglKaqEmEqQveiLkLEk
                   +A++nLV+aa+++a   ++d +  ++++++++g++aq++++Q+e+Lk+E+
   mKIAA0320  1395 RASDNLVRAAQKAAFGKADDDD--VVVKTKFVGGIAQIIAAQEEMLKKER 1442 

                   eLeeARkkLaelRKqhYela<-*
                   eLeeARkkLa++R+q+Y++    
   mKIAA0320  1443 ELEEARKKLAQIRQQQYKFL    1462 

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