hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01653/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0317  ( 826 res)   mbg01653

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   541.8   2.7e-158   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1     484   826 .]     1   407 []   541.8 2.7e-158

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 484 to 826: score 541.8, E = 2.7e-158
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      n+s +d++k+    +e++f      ++Ee+lD+GG++rE+f l++k 
   mKIAA0317   484    NFSISDWSKN----FEVVF------QDEEALDWGGPRREWFELICKA 520  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   lf+ t++ + r++++++               L +++++++  +++l+  
   mKIAA0317   521 LFDTTSQLFARFTDSNQ--------------ALVHPNPNRP-AHLRLK-- 553  

                   yFrfiGrvlGkAlye.......nrllDlrFarpFyKkLLgkpkgtdvtlh
                   +++f Gr++Gk+lye++ ++  ++l+ +rF+r+F+++++g++    ++++
   mKIAA0317   554 MYEFAGRLVGKCLYEsslggayKQLVRARFTRSFLAQIIGLR----MHYK 599  

                   DleslDPelyksLvwLilvrrKleleeDlseeskslenditeveldmaLt
                   ++e  DPe+yks v++i                  l+nd++e  +++  +
   mKIAA0317   600 YFETDDPEFYKSKVCFI------------------LNNDMSE--MEL-VF 628  

                   FsivlesdfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekq
                    +++++++ +  k vEL++GG+++pVT++Nk++Y++l+++yrl  +v++ 
   mKIAA0317   629 AEEKYNKSGQLDKIVELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEE 678  

                   leAFreGFseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrg
                   +e+F++G++e++pe+lL+ +Fde+ELeLL+cG++ +i+v+d+k +++++g
   mKIAA0317   679 VEHFLKGLNELVPENLLA-IFDENELELLMCGTG-DINVSDFKAHAVVVG 726  

                   gYtensqtirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaL
                   g++++++++  ++wFW vv+s+t+ee ++LLqF+TGss+lP  +gGFaaL
   mKIAA0317   727 GSWHFREKV--MRWFWAVVSSLTQEELARLLQFTTGSSQLP--PGGFAAL 772  

                   spsNGpqkFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKL
                   +p     +F+I  a+      ++ LPtAhTCfN+L+LP Y+S+e  +++L
   mKIAA0317   773 CP-----SFQIIAAP-----THSTLPTAHTCFNQLCLPTYDSYEEVHRML 812  

                   LlAInegRiggeGFgls<-*
                   +lAI e   g+eGFg++   
   mKIAA0317   813 QLAISE---GCEGFGML    826  

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