hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf01960/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0312  ( 2934 res)   mbf01960

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   666.9   6.2e-196   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1    2596  2934 .]     1   407 []   666.9 6.2e-196

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 2596 to 2934: score 666.9, E = 6.2e-196
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      ++sp+++k r    L+I+f      +gEeg D+GG+ rE+++ +s+e
   mKIAA0312  2596    RKSPEEMKNR----LYIVF------EGEEGQDAGGLLREWYMIISRE 2632 

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   +fnp +y+LFr+sp+d+           ++y+  p+ ++++ n+++    
   mKIAA0312  2633 MFNP-MYALFRTSPGDR-----------VTYTINPSSHCNP-NHLS---- 2665 

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   yF+f+Gr+++kA+y+nrll+++F+r+FyK++Lgk+    v ++D+es D+
   mKIAA0312  2666 YFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKS----VRYTDMESEDY 2711 

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                   ++y++Lv+L                   lend++++++d  LtFs+ +++
   mKIAA0312  2712 HFYQGLVYL-------------------LENDVSTLGYD--LTFSTEVQE 2740 

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    fg+++v++Lkp+G+ni VTeeNkkEYVhlv+++r+++ ++kql+AF+eG
   mKIAA0312  2741 -FGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEG 2789 

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F+e+ip++l++ +F+e+ELeLLi+Gl+ +id+ddLksnTey+ +Y+ ns+
   mKIAA0312  2790 FYEIIPKRLIS-IFTEQELELLISGLP-TIDIDDLKSNTEYH-KYQSNSI 2836 

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   +i   +wFW++++sF++ +r+k+LqFVTG+s++P  ++GFaaL+++NG+q
   mKIAA0312  2837 QI---QWFWRALRSFDQADRAKFLQFVTGTSKVP--LQGFAALEGMNGIQ 2881 

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                   kF+I+++++    ++drLP+AhTCfN+L+LP Y+S e+Lr++LLlAI+e 
   mKIAA0312  2882 KFQIHRDDR----STDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQE- 2926 

                   RiggeGFgls<-*
                     ++eGFgl+   
   mKIAA0312  2927 --CSEGFGLA    2934 

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