hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mth/mth02050/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0290  ( 512 res)   mth02050

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FCH      Fes/CIP4 homology domain                        76.1    4.2e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FCH        1/1       2    87 ..     1   103 []    76.1  4.2e-18

Alignments of top-scoring domains:
FCH: domain 1 of 1, from 2 to 87: score 76.1, E = 4.2e-18
                   *->mgfwselwsddGfeaLlsrlknglrlledlkkflreRakiEeeYAkk
                      + +++++   +Gfe+L++++k+g    ++l+ f+reRa+iEe Y+k 
   mKIAA0290     2    PLQGDKN---HGFEVLYHCVKQGPVATKELADFIRERANIEETYSKA 45   

                   Lqklskkyfnkkssvgdlravreteselgslkkswevllsetdalakshl
                   ++klsk               +++++++g++   wev++ + d+la +hl
   mKIAA0290    46 MAKLSKL--------------ASNGTPMGTFAPLWEVFRVSSDKLALCHL 81   

                   qlsedL<-*
                   +l+ +L   
   mKIAA0290    82 ELTRKL    87   

//