hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mia/mia14083/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0281  ( 741 res)   mia14083

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
ELMO_CED12 ELMO/CED-12 family                           183.4    3.6e-51   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
ELMO_CED12   1/1     332   505 ..     1   184 []   183.4  3.6e-51

Alignments of top-scoring domains:
ELMO_CED12: domain 1 of 1, from 332 to 505: score 183.4, E = 3.6e-51
                   *->pdhqelLkalwkllfpdatnevqkilDiieltgGsGaGnvlvSeqWk
                      + +++ + +l++++f+ +    +    + ++ +         +  +k
   mKIAA0281   332    QAQRDIIFELRRIAFDAESEPNNSSGSMEKRKS-------MYTRDYK 371  

                   emGFQGdidPsTDFRGcPPGfLaLenLlyFAenyptslqrllskqrgdra
                   ++GF   ++P+ DF  +PPG+LaL+n+lyFA+  ++++ r++++++++++
   mKIAA0281   372 KLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSRED 421  

                   eweyPFAvvgINiTfiliqlLrlgalkpefnrlavFlkmlfetesaFdal
                   ++e+PF++ +I++T++l+++L++g+   +++   +F++m+f++++ F+++
   mKIAA0281   422 KHECPFGRSSIELTKMLCEILKVGE--LPSETCNDFHPMFFTHDRSFEEF 469  

                   yCiafhlfdrqWlemqartimefntVlksvreqlere<-*
                   +Ci+ +l++++W+em+a t ++fn+V+++v eq  r+   
   mKIAA0281   470 FCICIQLLNKTWKEMRA-TSEDFNKVMQVVKEQVMRA    505  

//