hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mfj/mfj32020/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0263 ( 454 res) mfj32020 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IPK Inositol polyphosphate kinase 426.3 2.7e-124 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IPK 1/1 156 447 .. 1 385 [] 426.3 2.7e-124 Alignments of top-scoring domains: IPK: domain 1 of 1, from 156 to 447: score 426.3, E = 2.7e-124 *->keivklhpfveskkklypwvqlsgHkaegsfkaarrksGds..ssel k+ + ++++++s++++ p+v+l++H ++ +f+++ + +s+ sse+ mKIAA0263 156 KASLSFETSESSQEAKSPKVELHSH-SDVPFQML---DSNSglSSEK 198 kscnpwelrclkqlmkieaSGdllklDplrrqvpryhGRtlgvvesdrel s+npw+lrc+kq q++r++ ++++dr+l mKIAA0263 199 ISYNPWSLRCHKQ------------------QLSRMR-----SESKDRKL 225 gekfLlLEDLlsdfekPCVmDlKmGtRThlddAlSeeKkkrqLRkDMYeK +kfLlLE+++++f++PCV+DlKmGtR+h+ddA S eK++rq+R mKIAA0263 226 -YKFLLLENVVHHFKYPCVLDLKMGTRQHGDDA-SAEKAARQMR------ 267 MiavDpeAPTeEEhAqgAVTKPRYMqwKcrqSTsAtLGFRieGmkvydgt Kc+qSTsAtLG+R++Gm+vy+++ mKIAA0263 268 ---------------------------KCEQSTSATLGVRVCGMQVYQLD 290 sesNflsleaaeeeAdstyfkitKkyGrslnvegvrlalkqFfssnslsr +++ y++++K+yGr+l++eg+r+al+q++++++++r mKIAA0263 291 TGH---------------YLCRNKYYGRGLSIEGFRNALYQYLHNGLDLR 325 ralPcaFAsVygGcerilrqLlelravLErqteffesyrfisSSLLfvyD r+l +e+il++L++l+avLErq+ syrf+sSSLL++yD mKIAA0263 326 RDL----------FEPILSKLRGLKAVLERQA----SYRFYSSSLLVIYD 361 gesewEl..........................rlFiaDsdkdDiddlsq g+ E++++ + ++ + + ++ +++ +++++++ ++ mKIAA0263 362 GK---ECrselrlkhvdmglpevpppcgpstspSS-------------TS 395 ndadeSsggpkdKkitgslVkVklIDFAhstplPdGqtldhdspwyeGnr +a++Ss ++V+V++IDFAhst+ +G +++d+++++G + mKIAA0263 396 LEAGPSSP---------PKVDVRMIDFAHSTF--KG--FRDDPTVHDG-P 431 DdGyLlGLdnLIeIle<-* D+Gy++GL+nLI I+e mKIAA0263 432 DRGYVFGLENLISIME 447 //