hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg11214/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0237  ( 263 res)   mbg11214

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       C2 domain                                       73.3    4.9e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/1     126   213 ..     1    88 []    73.3  4.9e-18

Alignments of top-scoring domains:
C2: domain 1 of 1, from 126 to 213: score 73.3, E = 4.9e-18
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      L+V vieA++L pk ++++++ +Y k +l+  + +  kkkTkv+kkt
   mKIAA0237   126    LEVEVIEARGLTPKPGSKSLPATYIKAYLLENGACvAKKKTKVAKKT 172  

                   lNPvWNEtFtFevpppdlqetLeieVy.DydrfgrddflGevs<-*
                   ++P + + + F+   p++++ L++ V++Dy+r+ +  f+G+++   
   mKIAA0237   173 CDPLYQQALLFD-EGPQGKV-LQVIVWgDYGRMDHKCFMGMAQ    213  

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