hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/msp/msp04237/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0218  ( 796 res)   msp04237

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TatD_DNase   TatD related DNase                         264.2    1.7e-75   1
Amidohydro_2 Amidohydrolase                             -21.3       0.76   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TatD_DNase     1/1     528   795 ..     1   327 []   264.2  1.7e-75
Amidohydro_2   1/1     596   796 .]     1   329 []   -21.3     0.76

Alignments of top-scoring domains:
TatD_DNase: domain 1 of 1, from 528 to 795: score 264.2, E = 1.7e-75
                   *->MkkliDtHcHLDpl.gllA..........idfe.Fdkdreevedier
                       +++iDtHcHLD+l  +l+ +++ ++ ++i++++F k++ +   i+ 
   mKIAA0218   528    -EGFIDTHCHLDMLySKLSfkgtftkfrkIYSSsFPKEFQGC--ISD 571  

                   areagvkkvvvpahdpgrtgvgtsledfdalralelaekypnvaglklya
                   ++                     ++++  + +  el ++  ++    ++ 
   mKIAA0218   572 FC---------------------DPRTLTDGLWEELLKE--DL----VWG 594  

                   avGvHPheadefsdedleeleelleelelhaklveepdkvvAIGEiGLDy
                   a+G+HPh+a+++++  + +l+ +l++   +        k+vA GE+GLDy
   mKIAA0218   595 AFGCHPHFARYYNESQERKLLHALRH---P--------KAVAFGEMGLDY 633  

                   ypvyakderrqfspkkevQeeevFraQleLAkelnlPvviHtRdAheaet
                           ++++ p  ++Q++ vF++Ql+LA  l++P+viH+R+A+e   
   mKIAA0218   634 S-------HKCTTPV-PEQHQ-VFERQLKLAVSLKKPLVIHCREADE--- 671  

                   dtleiLkee.gpkvggvlHcFtGsveeAkelldlG..fYisisGivTfKn
                   d+l+i++++ +++ +++ HcFtGs+ + + ll++ +++ ++++ ++T++ 
   mKIAA0218   672 DLLDIMRKFvPSDYKIHRHCFTGSYSVIEPLLKYFpnMSVGFTAVLTYSS 721  

                   taeelrevakeiPldrlLlETDaPylaP.reakrdvvPtHdeedPekkkl
                    a e+r+++++iPl+r+++ETDaPy +P+       vP            
   mKIAA0218   722 -AWEARDALRQIPLERIIVETDAPYFLPrQ------VP------------ 752  

                   rLpyrGkkrNePayvphvaekiAelkgisleevakitteNakrlFg<-*
                      +  ++  +P    h++++iA++k++sl  +  +++eN++rl++   
   mKIAA0218   753 ---RSLCQYAHPGLALHTVREIARVKEESLSHTLSVLRENTCRLYS    795  

Amidohydro_2: domain 1 of 1, from 596 to 796: score -21.3, E = 0.76
                   *->iDaHaHlpvpglayrrldrppsdpgrlpamrrrgydprdaspadllv
                      + +H H                           +++++         
   mKIAA0218   596    FGCHPH---------------------------FARYY--------- 606  

                   lgaagvaravivaascrgannrvlaealarpdrfvggaalpppdpedala
                                   ++  +r l++al++p ++++g        e +l+
   mKIAA0218   607 ----------------NESQERKLLHALRHPKAVAFG--------EMGLD 632  

                   eleralgelGfrGvrlnphlggdppldprlelddprlrpiyealaelglp
                      ++                ++p  ++++e       + +++++ l+ p
   mKIAA0218   633 YSHKCT--------------TPVPEQHQVFE-------RQLKLAVSLKKP 661  

                   vdiH...........................tGPgphppagwdsglswgf
                   ++iH ++ +++  +  ++  +++ + +++  tG                 
   mKIAA0218   662 LVIHcreadedlldimrkfvpsdykihrhcfTG----------------- 694  

                   gfageplrasqpllleglarrfPdLkivldHaGgpwlpiavrlgvlagwr
                                 +e+l++ fP+       +  +               
   mKIAA0218   695 ----------SYSVIEPLLKYFPN-------MSVG--------------- 712  

                   ealallarypnvyvklsglfrssplkdlpevrrnlsyfdspaadppalae
                       ++ +y + +                                  +++
   mKIAA0218   713 --FTAVLTYSSAW---------------------------------EARD 727  

                   lleafgpdRllFGSDyPhppl.rslaalllldlllllllel.........
                   +l  ++ +R++  +D P++ +++ +  l + +++ l+l++ ++  + +++
   mKIAA0218   728 ALRQIPLERIIVETDAPYFLPrQVPRSLCQYAHPGLALHTVreiarvkee 777  

                   seeerekilggNAarlygl<-*
                   s      +l++N  rly l   
   mKIAA0218   778 SLSHTLSVLRENTCRLYSL    796  

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