hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm10302/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0215  ( 822 res)   mpm10302

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PHD      PHD-finger                                      67.1    3.8e-16   1
C1_1     Phorbol esters/diacylglycerol binding domain     7.8      0.036   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C1_1       1/1     184   241 ..     1    55 []     7.8    0.036
PHD        1/1     201   249 ..     1    51 []    67.1  3.8e-16

Alignments of top-scoring domains:
C1_1: domain 1 of 1, from 184 to 241: score 7.8, E = 0.036
                   *->HhFvhrw....nfkqptfCdhCgellwgslgkqGlkCswCklnvHkr
                      H ++   + +  ++  + Cd+C+++ +   g  ++ C+ C+++vH+ 
   mKIAA0215   184    HAIETVEglgiEYDEDVICDVCRSPDSE-EGNDMVFCDKCNVCVHQA 229  

                   ChekVppeCgcg<-*
                   C+  +++ +g +   
   mKIAA0215   230 CYGILKIPEGSW    241  

PHD: domain 1 of 1, from 201 to 249: score 67.1, E = 3.8e-16
                   *->yCsvCgkpdddaggdllqCDgCdrwfHlaClgppleeppegkWlCpe
                      +C vC++pd++ g+d+++CD+C++++H+aC+g+  +  peg WlC++
   mKIAA0215   201    ICDVCRSPDSEEGNDMVFCDKCNVCVHQACYGILKI--PEGSWLCRS 245  

                   Ctpk<-*
                   C+ +   
   mKIAA0215   246 CVLG    249  

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