hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm02229/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0212  ( 674 res)   mpm02229

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
Glyco_hydro_47 Glycosyl hydrolase family 47             879.3   1.2e-260   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Glyco_hydro_47   1/1     154   603 ..     1   518 []   879.3 1.2e-260

Alignments of top-scoring domains:
Glyco_hydro_47: domain 1 of 1, from 154 to 603: score 879.3, E = 1.2e-260
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrd.ndPsnlhssdifGesn
                      MF++++d+Y+ +A+++DEL+Pi crgr++d++dPsnl+++d++G  n
   mKIAA0212   154    MFVFGYDNYMAHAFPQDELNPIYCRGRGPDrGDPSNLNINDVLG--N 198  

                   lgaTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTI
                   +++T+vDaLDTL+iMG+  Ef++Av++v++t+sfd   +dstV+VFE TI
   mKIAA0212   199 YSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFD---KDSTVQVFEATI 245  

                   RvlGGLLSAYaLtgdpkk.lgdvegsdydkmLLkKAvdlAdrLLpAF.nT
                   RvlG+LLSA+++++d+k+++gd+++ dyd++LL++A+dlA+rLLpAF+nT
   mKIAA0212   246 RVLGSLLSAHRIITDSKQpFGDMTIEDYDNELLYMAHDLAVRLLPAFeNT 295  

                   ptGIPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdpt
                   +tGIPy+rvNlk+gv+++ ++    ++++A++G+Ll EF++LSrL+Gd+t
   mKIAA0212   296 KTGIPYPRVNLKTGVPPDSNN----ETCTAGAGSLLVEFGILSRLLGDST 341  

                   YekkarkardaLwklrpscekpeGLypnyinpqtGqqwtqshislGAggD
                   +e++ar+a++aLw+lr    + +GL++n++n+qtG +w +++++lGAg+D
   mKIAA0212   342 FEWVARRAVKALWNLR---SNDTGLLGNVVNIQTG-HWVGKQSGLGAGLD 387  

                   GSfYEYLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfae
                    SfYEYLlK+yil+g++++  ++m+n+A+++i+ +lrr+++    + ++e
   mKIAA0212   388 -SFYEYLLKSYILFGEKED--LEMFNAAYQSIQSYLRRGRE----A-CNE 429  

                   lkngrfkilepkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeia
                    +++      p ++++++F+G+l+++++dsl+affpg  lqvl+gd+e+a
   mKIAA0212   430 GEGDP-----PLYVNVNMFSGQLMNTWIDSLQAFFPG--LQVLIGDVEDA 472  

                   itcHemYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypL
                   i+ H++Y+++w+++G +p+r+n++++           a++vl    fypL
   mKIAA0212   473 ICLHAFYYAIWKRYGALPERYNWQLQ-----------APDVL----FYPL 507  

                   RPEviEStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgg
                   RPE++ESty+LY+  aTk+p+      Y+++g++++q+leky++vkcG  
   mKIAA0212   508 RPELVESTYLLYQ--ATKNPF------YLHVGMDILQSLEKYTKVKCG-- 547  

                   lssRyaglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalqvell
                       ya+l++V++ks+   eDrMESFfL+ET+KYLYLlFd++n  +v++ 
   mKIAA0212   548 ----YATLHHVIDKSK---EDRMESFFLSETCKYLYLLFDEEN--PVHKS 588  

                   pldkctdevqgnwVFNTEAHPlpi<-*
                   +++         ++F+TE+H++++   
   mKIAA0212   589 GTR---------YMFTTEGHIISV    603  

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