hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mth/mth00856/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0209  ( 1567 res)   mth00856

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Ded_cyto Dedicator of cytokinesis                        14.5    1.3e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Ded_cyto   1/1    1169  1355 ..     1   192 []    14.5  1.3e-07

Alignments of top-scoring domains:
Ded_cyto: domain 1 of 1, from 1169 to 1355: score 14.5, E = 1.3e-07
                   *->tyFernnnvrrFmyetPFTknGtAtkaQGeleEQwKRkTiLttensF
                        F + n v  F y+ P         + +e++  w  +T + t+   
   mKIAA0209  1169    INFYKSNYVQKFHYSRPVRRGK--VDPENEFASMWIERTSFLTAYKL 1213 

                   PyiktRilVisreeielsPIEVAIedIqkKtaeLaaainqppa.dtlpdi
                   P i++   V++ +++ +sP E+AIe++++ +      inq ++++ lp i
   mKIAA0209  1214 PGILRWFEVVHMSQTTISPLENAIETMSTVNEKILMMINQYQSdESLP-I 1262 

                   kmLQmvLQGSVgvtVNaGPLevAraFLseepLkadplGrPpdkhinkLrl
                    +L+m+L+G+V+  V +G   +  aF  ee+    p+     +++  L++
   mKIAA0209  1263 NPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYSREHPE---DQDKLSHLKD 1309 

                   vfreFikrCkrALevnkrLIgeDQkEYqreLkeNYekLkeeLsplI<-*
                        i   +  +++++  ++ + + ++  ++e +  Lk +        
   mKIAA0209  1310 LIAWQIPFLGAGIKIHEKRVSDNLRPFHDRMEECFKNLKMKVEKEY    1355 

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