hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01039/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0204  ( 1307 res)   mbg01039

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
S_TKc    Serine/Threonine protein kinases, catalytic    344.2    8.3e-99   1
TyrKc    Tyrosine kinase, catalytic domain               69.8    3.4e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
S_TKc      1/1     139   397 ..     1   231 []   344.2  8.3e-99
TyrKc      1/1     139   397 ..     1   280 []    69.8  3.4e-16

Alignments of top-scoring domains:
S_TKc: domain 1 of 1, from 139 to 397: score 344.2, E = 8.3e-99
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.......erilrEi
                      +e++ +lG GaFGkVy+a++k+t+ l A Kvi+++++++ e+ + Ei
   mKIAA0204   139    WEIIGELGDGAFGKVYKAQNKETNVLAAAKVIDtkseeelEDYMVEI 185  

                   kiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrrgl
                   +iL + dHPNIVkL+d+f+ +++l++  E+c G  G +  ++ +  r+  
   mKIAA0204   186 DILAScDHPNIVKLLDAFYYeNNLWILIEFCAG--GAVDAVMLELERP-- 231  

                   rkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvKlaD
                      l+E++++ +++Q+l+aL+YLH+++IiHRDLK  NiL++ ++ +KlaD
   mKIAA0204   232 ---LTEsQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLdgDIKLAD 278  

                   FGlArql.......ttfvGTpeYmAPEvl........gYgkpavDiWSlG
                   FG++++ +++ +++++f+GTp++mAPEv+  +++++++Y++ ++D+WSlG
   mKIAA0204   279 FGVSAKNtrtiqrrDSFIGTPYWMAPEVVmcetskdrPYDY-KADVWSLG 327  

                   cilyElltGkpPFp...qldlifkkig............SpeakdLikkl
                   ++l+E++  +pP ++ + + +++k+ ++++++   ++++S+ +kd+++k+
   mKIAA0204   328 ITLIEMAEIEPPHHelnPMRVLLKIAKsepptlaqpskwSSNFKDFLRKC 377  

                   LvkdPekRlta.eaLedeldikaHPff<-*
                   L+k+ + R+t +++L+       HPf+   
   mKIAA0204   378 LEKNVDARWTTsQLLQ-------HPFV    397  

TyrKc: domain 1 of 1, from 139 to 397: score 69.8, E = 3.4e-16
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda...keeFlrEa
                       + + +LG GaFG+Vyk++ k++++  A K++   +++++e+ + E+
   mKIAA0204   139    WEIIGELGDGAFGKVYKAQNKetnVLAAAKVIDTKSeeeLEDYMVEI 185  

                   kiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyLr
                    i+ +   +HpNiVkLl +   e         l+i+ E+++gG+ +    
   mKIAA0204   186 DILASC--DHPNIVKLLDAFYYE-------NNLWILIEFCAGGAVDAVML 226  

                   knrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvvKI
                   + ++ l+ s+    + Q  +  +YL++++++HRDL A N+L + ++ +K 
   mKIAA0204   227 ELERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKL 276  

                   sDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEsl.....k
                   +DFG s + +            r  +  g+       WmAPE+   +++k
   mKIAA0204   277 ADFGVSAKNTRT--------IQRRDSFIGTP-----YWMAPEVVmcetsK 313  

                   dgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGy.
                   d+ +  k DVWS G++L E+    e+P+ +     +++ +vl ++ k ++
   mKIAA0204   314 DRPYDYKADVWSLGITLIEMAE-IEPPHHE-----LNPMRVLLKIAKSEp 357  

                   .RlpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-
                   + l +P           ++   d  ++C + + + R t s+l ++ +   
   mKIAA0204   358 pTLAQPSK--------WSSNFKDFLRKCLEKNVDARWTTSQLlqHPFV   397  

                   *
                    
   mKIAA0204     -   -    

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