hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mib/mib20025/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0201  ( 570 res)   mib20025

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HSP70    Hsp70 protein                                 -131.9    2.1e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HSP70      1/1       1   421 [.     1   620 []  -131.9  2.1e-11

Alignments of top-scoring domains:
HSP70: domain 1 of 1, from 1 to 421: score -131.9, E = 2.1e-11
                   *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGERLV
                                                                     
   mKIAA0201     -    ----------------------------------------------- -    

                   GqaAKrQavtNpeNTvfsvKRlIGRrFddpeVqkdikhvPykvvkdsngd
                                                                     
   mKIAA0201     - -------------------------------------------------- -    

                   awveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITVPAYF
                                                                     
   mKIAA0201     - -------------------------------------------------- -    

                   NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernil
                                                                     
   mKIAA0201     - -------------------------------------------------- -    

                   VfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeFk
                                                                     
   mKIAA0201     - -------------------------------------------------- -    

                   kkegiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitadadGPkh
                                                           +++++ + k+
   mKIAA0201     1 ----------------------------------------ECFMN-D-KD 8    

                   lsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGSTR
                   +s++++R++FEeL+a L++++  P+++  +++ l+++d+  +++VGG+TR
   mKIAA0201     9 VSGKMNRSQFEELCAELLQKIEVPLHSLMAQTQLKAEDVSAIEIVGGATR 58   

                   IPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsGseeVkDvlL
                   IP+V+e + +fFG  K+ s+++N DEAVA+G+A+Q+++Ls++++V+++  
   mKIAA0201    59 IPAVKERIAKFFG--KDVSTTLNADEAVARGCALQCAILSPAFKVREFSV 106  

                   LDVtPLSLGIETlGGv.mtklIeRNTTIPTkks.qiFSTaaDNQt.aVeI
                    D +P    I++ ++ + ++     ++++ +++ +++++ ++ + +++e+
   mKIAA0201   107 TDAVP--FPISLVWNHdSEETEGVHEVFSRNHAaPFSKVLTFLRRgPFEL 154  

                   qVlQGERelakDN.klLGqFeLdGIpPAPrG.vPqIEVtFdIDANGIlnV
                   ++++ +++ +++ +  +G+F ++ + ++ +G+   ++V+++++ +GI+++
   mKIAA0201   155 EAFYSDPQGVPYPeAKIGRFVVQNVSAQKDGeKSRVKVKVRVNTHGIFTI 204  

                   sAkDkgtgkeqkItItnssgrLsddEIer.....................
                   s + +    e   t ++++  L +d +  +++++++++ +++ ++++++ 
   mKIAA0201   205 STASM---VEKVPTEEEDGSSLEADMECPnqrptessdvdkniqqdnsea 251  

                   ..................................................
                   +++++ +++++++++++++++ +++++++++ ++ ++++ +++++ ++++
   mKIAA0201   252 gtqpqvqtdgqqtsqsppspeltseesktpdadkanekkvdqppeakkpk 301  

                   ........................MvkdAE.kyaeeDkkrkeriEakNea
                    +  + + + + +   + +++  +M  + E+k+  +Dk  ker +akN  
   mKIAA0201   302 ikvvnvelpveanlvwqlgrdllnMYIETEgKMIMQDKLEKERNDAKNAV 351  

                   EsyvystekslkeeklgdklseadkekiekkvedaiewLkealegeddae
                   E+ vy+ +++l    +++++ e++ ek+   ++++++wL+e++e+     
   mKIAA0201   352 EECVYEFRDKLCGP-YEKFICEQEHEKFLRLLTETEDWLYEEGEDQA--- 397  

                   keeikakteeLqkvvqkigekmyq<-*
                   k+++ +k+eeL k ++++  + ++   
   mKIAA0201   398 KQAYIDKLEELMKMGTPVKVRFQE    421  

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