hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01769/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0174  ( 222 res)   mbg01769

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF292   Eukaryotic protein of unknown function, DUF2   198.9    7.8e-56   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF292     1/1       1   105 [.     1   131 []   198.9  7.8e-56

Alignments of top-scoring domains:
DUF292: domain 1 of 1, from 1 to 105: score 198.9, E = 7.8e-56
                   *->LainRLklLrnKkealakqlRReiAdLLasGkdarAriRVEhlIrEd
                                        ++R+eiAd+La+Gkd+rAriRVEh+IrEd
   mKIAA0174     1    ------------------KARKEIADYLAAGKDERARIRVEHIIRED 29   

                   ilvealEiLelyCeLLlaRlgvIekqktEEqLvKeelpdgikEAvsSLif
                   +lvea+EiLelyC+LLlaR+g+I+++k        el++g++E+vs+Li+
   mKIAA0174    30 YLVEAMEILELYCDLLLARFGLIQSMK--------ELDSGLAESVSTLIW 71   

                   AAprlssdipELrelrdlfvkKYGkeFaeaarel<-*
                   AAprl+s+++EL++++d++++KY+ke+++++r++   
   mKIAA0174    72 AAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTN    105  

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