hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh02656/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0172  ( 934 res)   mbh02656

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                101.8    7.9e-26   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/5     743   773 ..     1    30 []    29.0  0.00067
ANK        2/5     777   810 ..     1    30 []    13.1       39
ANK        3/5     815   844 ..     1    30 []    33.8  2.4e-05
ANK        4/5     848   880 ..     1    30 []    21.7      0.1
ANK        5/5     882   910 ..     1    30 []    12.0       85

Alignments of top-scoring domains:
ANK: domain 1 of 5, from 743 to 773: score 29.0, E = 0.00067
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+T+LH+ +++ n  +vklLld+++ +++    
   mKIAA0172   743    NGNTALHYSVSHSNFQIVKLLLDADVcNVDH    773  

ANK: domain 2 of 5, from 777 to 810: score 13.1, E = 39
                   *->dGrTpLHlAaen.....gnlevvklLldkgadina<-*
                       G+Tp++lAa    + ++++ vv++L + g d+na   
   mKIAA0172   777    AGYTPIMLAALAaveaeKDMQVVEELFSCG-DVNA    810  

ANK: domain 3 of 5, from 815 to 844: score 33.8, E = 2.4e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+L+lA+++g++++vk Ll  gad+n+   
   mKIAA0172   815    AGQTALMLAVSHGRIDMVKGLLACGADVNI    844  

ANK: domain 4 of 5, from 848 to 880: score 21.7, E = 0.1
                   *->dGrTpLHlAaengnlevvklLldkga...dina<-*
                      +G T+L++A e+g++e+vklLl   + ++ +++   
   mKIAA0172   848    EGSTALMCASEHGHVEIVKLLLAQPGcngHLED    880  

ANK: domain 5 of 5, from 882 to 910: score 12.0, E = 85
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG T+L +A e g+++++ lL  +  ++ +   
   mKIAA0172   882    DGSTALSIALEAGHKDIAVLLYAHL-NFSK    910  

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