hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/smart.HMMs Sequence file: /cdna4/rodent/full/goal/meh/meh00412/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0171 ( 475 res) meh00412 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ENTH Epsin N-terminal homology (ENTH) domain 218.8 4.8e-61 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ENTH 1/1 41 168 .. 1 137 [] 218.8 4.8e-61 Alignments of top-scoring domains: ENTH: domain 1 of 1, from 41 to 168: score 218.8, E = 4.8e-61 *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw s+ e+kVr+ATn+d+wgp+g+++ eI+++T ++ ++f+e+m++lw mKIAA0171 41 SEIESKVREATNDDPWGPSGQLMGEIAKATFMY---EQFPELMNMLW 84 rRLndk.gknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsd +R+ ++++knWr+vyK+L+ll yL+rnGs ervv +a+++++++++L++ mKIAA0171 85 SRMLKDnKKNWRRVYKSLLLLAYLIRNGS--ERVVTSAREHIYDLRSLEN 132 fqdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-* +++ +d++gkDqG+niR+++k+L+e ++dd+rl+eer mKIAA0171 133 YHF-----VDEHGKDQGINIRQKVKELVEFAQDDDRLREER 168 //