hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05359/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0158  ( 367 res)   mpm05359

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GTP_CDC  Cell division protein                          688.6     3e-203   1
MMR_HSR1 GTPase of unknown function                       2.6     0.0039   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MMR_HSR1   1/1      44   149 ..     1   140 []     2.6   0.0039
GTP_CDC    1/1      40   319 ..     1   294 []   688.6   3e-203

Alignments of top-scoring domains:
MMR_HSR1: domain 1 of 1, from 44 to 149: score 2.6, E = 0.0039
                   *->lrvaivGrPNVGKSTLiNaLtgk.............kraiVsdyPGt
                      ++ ++vG +  GKSTLiN+L   +  +++  ++  +k+ ++  +   
   mKIAA0158    44    FTLMVVGESGLGKSTLINSLFLTdlyperiipgaaeKIERTVQIEAS 90   

                   TrdpnegrveldgrqiilvDTPGiiegaskgegelgertleaieeaDlil
                   T+++ e+ v+    ++++vDTPG++++                      +
   mKIAA0158    91 TVEIEERGVK---LRLTVVDTPGYGDA----------------------I 115  

                   fVvDase.gltedytieeDleiadllyd.eerernleltLqelekkgkPv
                   ++ D++++ ++       D+++ ++l ++e            l++++  +
   mKIAA0158   116 NCRDCFKtIIS-----YIDEQFERYL-HdESG----------LNRRH--I 147  

                   ilvlNKiD<-*
                         iD   
   mKIAA0158   148 ------ID    149  

GTP_CDC: domain 1 of 1, from 40 to 319: score 688.6, E = 3e-203
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLidangvanDsreidgpae
                      kGf+FTLMVVGeSGLGK+TlIN+LFltdL+++       r+i+g+ae
   mKIAA0158    40    KGFEFTLMVVGESGLGKSTLINSLFLTDLYPE-------RIIPGAAE 79   

                   tkikkTveIkeitkveiEEdGvkLnLTViDTPGFGDaiDNskcWepIveY
                    ki++Tv+I+ +++veiEE+GvkL+LTV+DTPG+GDai++++c+++I+ Y
   mKIAA0158    80 -KIERTVQIE-ASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISY 127  

                   IdeQheqYLrqEsrinRetkivDnRVHcCLYFIsPtGhgLkpLDvefMKk
                   IdeQ+e+YL++Es++nR ++i+DnRVHcC+YFIsP+GhgLkpLDv+fMK+
   mKIAA0158   128 IDEQFERYLHDESGLNR-RHIIDNRVHCCFYFISPFGHGLKPLDVAFMKA 176  

                   LsekVNlIPVIAKADtLTadElqefKkrIreeierqnIkIYkFPPdeeed
                   +++kVN++PVIAKADtLT++E++++KkrI++eie+++IkIY++ Pd e+d
   mKIAA0158   177 IHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHL-PDAESD 225  

                   eGDEefkeqtqqLkssiPFAIVGSneeiengdGekVRGRkYPWGvVEVEN
                   e DE+fkeqt+ Lk+siPF++VGSn++ie+ +G+kVRGR+YPWGvVEVEN
   mKIAA0158   226 E-DEDFKEQTRLLKASIPFSVVGSNQLIEA-KGKKVRGRLYPWGVVEVEN 273  

                   psHCDFvkLRnlLirtHLqDLketTeeilYEnYRsekLsalglkaen<-*
                   p+H+DF+kLR++Li tH+qDL+e+T++++YEn+Rse+L+++g+k+en   
   mKIAA0158   274 PEHNDFLKLRTMLI-THMQDLQEVTQDLHYENFRSERLKRGGRKVEN    319  

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