hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbj/mbj00784/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0148  ( 722 res)   mbj00784

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ArfGap   Putative GTP-ase activating proteins for the   206.5    2.4e-57   1
ANK      ankyrin repeats                                 33.9    2.1e-05   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ArfGap     1/1      41   166 ..     1   139 []   206.5  2.4e-57
ANK        1/3     174   203 ..     1    30 []     7.6  4.5e+02
ANK        2/3     208   237 ..     1    30 []    14.0       21
ANK        3/3     241   270 ..     1    30 []    12.3       68

Alignments of top-scoring domains:
ArfGap: domain 1 of 1, from 41 to 166: score 206.5, E = 2.4e-57
                   *->eealqlLRsikpgNkkCfDCGavpnPtWaSvnlGvflCieCSGiHRs
                       +++++LRs++    +C+DC+  p+P WaSvn+G+f+C eC+++HRs
   mKIAA0148    41    GTMSKRLRSSD----VCADCNG-PDPSWASVNRGTFICDECCSVHRS 82   

                   LfGvHiSkVnvRSltLDtWteeeLrllesckgGNenansfwesnlddfsl
                   L G+HiS+V  R+l++++W+++ L+++e  +++N++ans+we+ l d+++
   mKIAA0148    83 L-GRHISQV--RHLKHTAWPPTLLQMVE--TLYNNGANSIWEHSLLDPAS 127  

                   kpkdsda.aasv.KCeddrqkyesfiaaKYeeklfrvdkesaee<-*
                   +++++ ++a++++K   +++++ +fi+aKY++++f v++++++e   
   mKIAA0148   128 IMSGR-RkANPQdK---VHPNKAEFIRAKYQMLAF-VHRLPCRE    166  

ANK: domain 1 of 3, from 174 to 203: score 7.6, E = 4.5e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d    LH  +++gnle++  Ll+ ga  n    
   mKIAA0148   174    DLSKQLHSSVRTGNLETCLRLLSLGAQANF    203  

ANK: domain 2 of 3, from 208 to 237: score 14.0, E = 21
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G TpLH+A + g++  ++lL  +gad+     
   mKIAA0148   208    KGSTPLHVASKAGQILQAELLAVYGADPGT    237  

ANK: domain 3 of 3, from 241 to 270: score 12.3, E = 68
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+Tp  +A + g++e+++ L++   ++++   
   mKIAA0148   241    SGKTPVDYARQGGHHELAERLIEIQYELTD    270  

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