hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg16251/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0145  ( 1039 res)   mbg16251

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DAGKa    Diacylglycerol kinase accessory domain (pres   342.4      3e-98   1
DAGKc    Diacylglycerol kinase catalytic domain (pres   219.9    2.2e-61   1
SAM      Sterile alpha motif.                            89.8    3.4e-22   1
C1       Protein kinase C conserved region 1 (C1) dom    48.1    1.1e-09   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C1         1/2       1    32 [.     1    61 []     8.9     0.48
C1         2/2      55   105 ..     1    61 []    47.3    2e-09
DAGKc      1/1     140   265 ..     1   157 []   219.9  2.2e-61
DAGKa      1/1     584   741 ..     1   195 []   342.4    3e-98
SAM        1/1     967  1033 ..     1    67 []    89.8  3.4e-22

Alignments of top-scoring domains:
C1: domain 1 of 2, from 1 to 32: score 8.9, E = 0.48
                   *->HkfvfrtfkptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkCa
                                       + ++g+      s+gl+C++Ck+k+Hk+Ca
   mKIAA0145     1    -----------------EVLSGVT-----SHGLSCEVCKFKAHKRCA 25   

                   ekvpaqshksglsC<-*
                   +++++       +C   
   mKIAA0145    26 VRATS-------NC    32   

C1: domain 2 of 2, from 55 to 105: score 47.3, E = 2e-09
                   *->Hkfvfrtf.kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkC
                      H++ +++ + +++C vC+k+++++ +     q +rC +Ck ++H +C
   mKIAA0145    55    HQWLEGNLpVSAKCIVCDKTCGSVLR----LQDWRCLWCKAMVHTSC 97   

                   aekvpaqshksglsC<-*
                   +e +          C   
   mKIAA0145    98 KESLVM-------KC    105  

DAGKc: domain 1 of 1, from 140 to 265: score 219.9, E = 2.2e-61
                   *->plLVfvNPkSGggqgeellkseskllrkfrelLnprqVfdltktggp
                      plLVfvN+kSG++qg+       k+lr+f +lLnp+qVfdl++ ggp
   mKIAA0145   140    PLLVFVNSKSGDNQGV-------KFLRRFKQLLNPAQVFDLMN-GGP 178  

                   dvglelefrdvpkfkeqsdqkgddrvlvcGGDGTvgwVlnaldkrelplq
                   + gl+l f+++++f          r+lvcGGDG vgwVl+ +d ++l++q
   mKIAA0145   179 HLGLRL-FQKFDTF----------RILVCGGDGSVGWVLSEIDSLNLHKQ 217  

                   cqvedrefpePPvailPlGTGNdLarvLgwgggydginekllkilkeale
                   cq          +++lPlGTGNdLarvLgwg ++d+  +++l++ + +le
   mKIAA0145   218 CQ----------LGVLPLGTGNDLARVLGWGSACDD--DTQLPQILAKLE 255  

                   eadtvkldrW<-*
                   +a+t++ldrW   
   mKIAA0145   256 RASTKMLDRW    265  

DAGKa: domain 1 of 1, from 584 to 741: score 342.4, E = 3e-98
                   *->iMNNYFSiGvDAkiaLeFHnsREanPekFnSRlkNKlwYfelGtkel
                      +MNNYF+iG+DAki+L+F+n+R+++Pek++SR+kN++wY+ lGtkel
   mKIAA0145   584    VMNNYFGIGLDAKISLDFNNKRDEHPEKCRSRTKNMMWYGVLGTKEL 630  

                   fartcKdLheqIeLecDGvdidlpnkdlslEGIivLNIPSygGGtnLWGe
                   ++rt+++L++++ LecDG++i lp    sl+GI+vLNIPSy+GGtn+WG+
   mKIAA0145   631 LHRTYRNLEQKVLLECDGRPIPLP----SLQGIAVLNIPSYAGGTNFWGG 676  

                   PfgskkkravcgifkksftdkedlnfekqsidDgllEVVGvtgamhmaqv
                                      +ked++f+ +s+dD++lEVV+v+g+m+ma +
   mKIAA0145   677 -------------------TKEDDTFAAPSFDDKILEVVAVFGSMQMAVS 707  

                   rtsiqvglasiilvkllKgrRiaQCsevrlkdtiltkktiPmQVDGEP<-
                   r   +++l+         ++RiaQC++v++   il+++ +P+QVDGE+  
   mKIAA0145   708 R---VIKLQ---------HHRIAQCRTVKI--SILGDEGVPVQVDGEA   741  

                   *
                    
   mKIAA0145     -   -    

SAM: domain 1 of 1, from 967 to 1033: score 89.8, E = 3.4e-22
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      v+ w  e+Va+WLe++ l++Y+d+F+++ i g+ell+l+ + dLk+l
   mKIAA0145   967    VHlWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSELLHLE-RRDLKDL 1012 

                   GitllGhRkkIlsaiqklkeq<-*
                   G+t++Gh k+Il++i++l  +   
   mKIAA0145  1013 GVTKVGHMKRILCGIKELSRS    1033 

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