hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfk/mfk00029/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0132  ( 637 res)   mfk00029

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac       100.2    2.5e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1      90   192 ..     1   114 []   100.2  2.5e-25

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 90 to 192: score 100.2, E = 2.5e-25
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      cDvtl+v+  +        +f a  Hk+vLa++   Sp+Fka+f+++
   mKIAA0132    90    CDVTLQVKYEDIPA----AQFMA--HKVVLASS---SPVFKAMFTNg 127  

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                    ++++ + + +++      ++p++++ l++f Yt ++++ e+   +v+++
   mKIAA0132   128 lreqgmevVSIEG------IHPKVMERLIEFAYTaSISVGEK---CVLHV 168  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   +  A ++    qi+++v++C +fl+++l   
   mKIAA0132   169 MNGAVMY----QIDsVVRACSDFLVQQL    192  

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