hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mie/mie06028/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0107  ( 403 res)   mie06028

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PCI      PCI domain                                     109.3    7.2e-29   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PCI        1/1     268   372 ..     1   135 []   109.3  7.2e-29

Alignments of top-scoring domains:
PCI: domain 1 of 1, from 268 to 372: score 109.3, E = 7.2e-29
                   *->payleLleafysgdlaefeelladhVvAkamkGwqkeeellqdpgla
                      pa+++ l+++y ++++ f++ la +           e+e  +d   a
   mKIAA0107   268    PAVRQYLFSLYECRYSVFFQSLAIV-----------EQEMKKDWLFA 303  

                   ekvwlegdkhleeLrrkirelnllqlakftypapyssislsdlaellgls
                   +        h+++++r++r +++ ql++     +y+s++l ++ae++g+ 
   mKIAA0107   304 P--------HYRYYVREMRIHAYSQLLE-----SYRSLTLGYMAEAFGVG 340  

                   vvedvlqdevEkilsklIadgrirgkIDqvngivvvse<-*
                   v      d+++++ls++Ia+gr+++kID vn+iv++++   
   mKIAA0107   341 V------DFIDQELSRFIAAGRLHCKIDKVNEIVETNR    372  

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