hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm06246/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0102  ( 215 res)   mpm06246

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SPC25    Microsomal signal peptidase 25 kDa subunit (   426.4   2.6e-124   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SPC25      1/1      32   213 ..     1   185 []   426.4 2.6e-124

Alignments of top-scoring domains:
SPC25: domain 1 of 1, from 32 to 213: score 426.4, E = 2.6e-124
                   *->dkpVKviNkwDgpavKnaLDEavkkvllGdRlgYkEsfgLlnlrLli
                      dkpVK+ +kwDg+avKn+LD+++kkvll ++++Y+E+fgL+++rL+i
   mKIAA0102    32    DKPVKI-DKWDGSAVKNSLDDSAKKVLL-EKYKYVENFGLIDGRLTI 76   

                   gtiivvvAivAlfyDykhpFPesrpvLalcvvaYFVLmgiLqlyssfkEK
                   +ti++++AivAl++Dy+hpFPes+pvLalcv++YFV+mgiL++y+s+kEK
   mKIAA0102    77 CTISCFFAIVALIWDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 126  

                   gtilvakrkdgtGsetsrewevSSklkkfdDkYtLtlefkdkkeigkkke
                   +++lva+rkd+tG++++++w++SS+lk+fdDkYtL+l+f+++++ ++++e
   mKIAA0102   127 SIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGRT-KQQRE 175  

                   lkltKSvakffdedGvLvedlykkevsrLhnaLatekk<-*
                   +++tKS+akffd++G+Lv+d+y++e+srLh++Late+k   
   mKIAA0102   176 AEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERK    213  

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