hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg05504/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0097  ( 1711 res)   mbg05504

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     74.4    2.3e-18   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/9      36    72 ..     1    36 []     1.8  1.4e+02
HEAT       2/9     114   150 ..     1    36 []    29.9  6.1e-05
HEAT       3/9     278   310 ..     1    36 []     2.2  1.2e+02
HEAT       4/9     430   466 ..     1    36 []    11.8      5.4
HEAT       5/9     535   571 ..     1    36 []     1.7  1.4e+02
HEAT       6/9     616   652 ..     1    36 []     6.5       30
HEAT       7/9     694   729 ..     1    36 []    15.7      1.1
HEAT       8/9    1000  1035 ..     1    36 []     4.7       54
HEAT       9/9    1041  1076 ..     1    36 []     0.0  2.4e+02

Alignments of top-scoring domains:
HEAT: domain 1 of 9, from 36 to 72: score 1.8, E = 1.4e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++  +++p++l+ ++ + p V +a  ea+ a+       
   mKIAA0097    36    GqYAGHVVPTILEKFKEKKPQVVQALQEAIDAIFLTT    72   

HEAT: domain 2 of 9, from 114 to 150: score 29.9, E = 6.1e-05
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++ll+ +  +llk++nD+ peVR+aA+eaLg+ ++v+   
   mKIAA0097   114    KsLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVV    150  

HEAT: domain 3 of 9, from 278 to 310: score 2.2, E = 1.2e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + l     p++++ll++++++ R+a+ e +++ +e +   
   mKIAA0097   278    AvLP----PTCIQLLDSSNWKERLACMEEFQKAVELM    310  

HEAT: domain 4 of 9, from 430 to 466: score 11.8, E = 5.4
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e  ++ ++  + ++l  ++p VR +A+  Lg ++ ++   
   mKIAA0097   430    ElNVKAFISNVKTALAATNPAVRTSAITLLGVMYLYV    466  

HEAT: domain 5 of 9, from 535 to 571: score 1.7, E = 1.4e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++ d++   l++ ++D+++++R+  +  ++ +++ +   
   mKIAA0097   535    IeISDKITSELVSKIGDKNWKIRKEGLDEVAGIINEA    571  

HEAT: domain 6 of 9, from 616 to 652: score 6.5, E = 30
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++++l  ++++ l+D+  +VR+aA+ ++ a ae+    
   mKIAA0097   616    RqHVKNLGIPVITVLGDSKNNVRAAALATVNAWAEQT    652  

HEAT: domain 7 of 9, from 694 to 729: score 15.7, E = 1.1
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +l+   +p+l ++l+D + +VR+ A  aL  ++ +l   
   mKIAA0097   694    TdLI-LCVPHLYSCLEDRNGDVRKKAQDALPFFMMHL    729  

HEAT: domain 8 of 9, from 1000 to 1035: score 4.7, E = 54
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++  +++p+++++ ++++++ R+ ++e Lg l+e +   
   mKIAA0097  1000    YpAS-KMFPFIMEGTKSKNSKQRAECLEELGCLIESY    1035 

HEAT: domain 9 of 9, from 1041 to 1076: score 0.0, E = 2.4e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++  + l  +  +++D d  VR aA+  ++++++v+   
   mKIAA0097  1041    QpTPGKALKEIAIHIGDRDNAVRNAALT-IVTVYNVH    1076 

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