hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04151/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0096  ( 750 res)   mbh04151

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
S_TKc    Serine/Threonine protein kinases, catalytic    359.7   1.8e-103   1
TyrKc    Tyrosine kinase, catalytic domain               72.3      6e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
S_TKc      1/1      18   271 ..     1   231 []   359.7 1.8e-103
TyrKc      1/1      18   271 ..     1   280 []    72.3    6e-17

Alignments of top-scoring domains:
S_TKc: domain 1 of 1, from 18 to 271: score 359.7, E = 1.8e-103
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                      Y+l k+lG+G F++V+lar++ tg++vA+Kvi++++ ++  + ++ +
   mKIAA0096    18    YDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDktkldtlatGHLFQ 64   

                   EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr
                   E++++k  +HPNIV+Ly+v+++++klyl++E+ +G  Gd+fd++ k+  +
   mKIAA0096    65 EVRCMKLvQHPNIVRLYEVIDTqTKLYLILELGDG--GDMFDYIMKHEEG 112  

                   glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds...hvK
                        l+E+ a++yf+Qi+ a+ Y+H+++++HRDLKPeN+ + ++++ vK
   mKIAA0096   113 -----LNEdLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEkqgLVK 157  

                   laDFGlArql......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcil
                   l+DFG++ +++++++ tt +G++ Y APE+l ++ Y+ pavDiWSlG+il
   mKIAA0096   158 LTDFGFSNKFqpgkklTTSCGSLAYSAPEILlgdEYDAPAVDIWSLGVIL 207  

                   yElltGkpPFp..qldlifkkig..........SpeakdLikklLvkdPe
                   + l++G+pPF++ ++ +++ +i++ +++ +++ S  ++dLi ++L++dP+
   mKIAA0096   208 FMLVCGQPPFQeaNDSETLTMIMdckytvpprvSAGCRDLITRMLQRDPK 257  

                   kRlta.eaLedeldikaHPff<-*
                   +R + +e+         HP++   
   mKIAA0096   258 RRASLeEIES-------HPWL    271  

TyrKc: domain 1 of 1, from 18 to 271: score 72.3, E = 6e-17
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                        l+k+LG+G+F +V +++   ++++VAVK++ + + ++     + +
   mKIAA0096    18    YDLDKTLGRGHFAVVKLARHVftgEKVAVKVIDKTKldtlaTGHLFQ 64   

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   E + Mk +  +HpNiV+L+ v+ ++         l++++E+ +gGd  dy
   mKIAA0096    65 EVRCMKLV--QHPNIVRLYEVIDTQ-------TKLYLILELGDGGDMFDY 105  

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk.v
                   + k+++ l+ +   ++  QI    +Y ++ ++vHRDL   N+   e+++ 
   mKIAA0096   106 IMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQgL 155  

                   vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg
                   vK +DFG s +   +      k+  ++    +g     +   APE l   
   mKIAA0096   156 VKLTDFGFSNKFQPG------KKLTTS----CGS----LAYSAPEILLGD 191  

                   kFt.skSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRl
                   ++  ++ D+WS GV L+ ++  G++P  +      +++e l  +++ ++ 
   mKIAA0096   192 EYDaPAVDIWSLGVILF-MLVCGQPPFQE-----ANDSETLTMIMDCKYT 235  

                   pkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                    +P           ++   dl+++  ++dP+ R + +e++++  l   
   mKIAA0096   236 VPPRV---------SAGCRDLITRMLQRDPKRRASLEEIesHPWL    271  

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