hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpk/mpk02578/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0092  ( 309 res)   mpk02578

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF1167  Protein of unknown function (DUF1167)          220.4    2.6e-62   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF1167    1/1      83   309 .]     1   475 []   220.4  2.6e-62

Alignments of top-scoring domains:
DUF1167: domain 1 of 1, from 83 to 309: score 220.4, E = 2.6e-62
                   *->hsppervvlPSFTQnepfqNchprrspstppkiypspNsqAlvsALK
                      hs++++v +P    ++pf+N+++rrsp +p+ +yp++Ns+A++sALK
   mKIAA0092    83    HSSSPYVLYPP---DKPFLNSDLRRSPNKPTFAYPESNSRAIFSALK 126  

                   tLQeKIrRLELERtQAEdnlnlLSREaaqYKKaLeeetnERnlakqEliK
                   +LQ+KIrRLELER+QAE+++++LSRE+++YKK+L+e+++ER+++k+E++K
   mKIAA0092   127 NLQDKIRRLELERIQAEESVKTLSRETIEYKKVLDEQIQERENSKNEESK 176  

                   qkkdisiQLssAqsrCnLLEKQLEYtkrMvlnvErEktmiLEqQaqLqRE
                   +++++ +QL +A+++CnLLEKQLEY+++M++++E+E+t++LE+Q++L+RE
   mKIAA0092   177 HNQELASQLVAAENKCNLLEKQLEYMRNMIKHAEMERTSVLEKQVSLERE 226  

                   keqDQmklqakLEKLdvLEkEclrLTttqatAEdKikeLEeKLkEEEhqR
                   +++DQ+++q++LEKLd+LE+E+++LT++qa+AE+K++eLE KL+EEE++R
   mKIAA0092   227 RQHDQTHVQSQLEKLDLLEQEYNKLTAMQALAEKKMQELESKLREEEQER 276  

                   klfQdkAaELQTGLEinrlIfeDkatPcVpNarriKkKKskPPeKKtsRn
                   k++Q++AaELQ GLE nrlIfe                     +K t   
   mKIAA0092   277 KRMQARAAELQSGLEANRLIFE---------------------DKTT--- 302  

                   clkrqPpyqlcsKlgdlpFvaeKstsPsHavvanvQlvlhlmkqhskalC
                             c                                       
   mKIAA0092   303 ---------SC--------------------------------------- 304  

                   ndkpirttslakavpsrsgkskklSvtPPssnGIcdeLSElLmtlqdEld
                                          +S                         
   mKIAA0092   305 -----------------------VS------------------------- 306  

                   QMsmeHqeLlkqikesethsvkddiEcELEaLvkkMEaKgnQIsKlkKhQ
                                                                     
   mKIAA0092     - -------------------------------------------------- -    

                   dsveKlqlkvqnsklketsgildEernpkgsknikgsprKkDclketpgf
                                                      +s+            
   mKIAA0092   307 -----------------------------------TST------------ 309  

                   qrrknlqplkDvhslQnkLrrddicWeq<-*
                                                  
   mKIAA0092     - ----------------------------    -    

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