hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04269/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0091  ( 1056 res)   mbh04269

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Peptidase_S8 Subtilase family                            95.7      9e-25   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Peptidase_S8   1/1     198   470 ..     1   349 []    95.7    9e-25

Alignments of top-scoring domains:
Peptidase_S8: domain 1 of 1, from 198 to 470: score 95.7, E = 9e-25
                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   *->yggsdinapaaWdrgytGkGvvvaViDTGidtnHpDLkgnyiggkki
                         + ++a+ +W+ gytG +v vaV DTG+  +Hp +k n+    k 
   mKIAA0091   198    QVAQTLQADVLWQMGYTGANVRVAVFDTGLSEKHPHFK-NV----KE 239  

                RF xxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   tsn.dpegsyDfndndsnpnDPgPryddsddngHGTHVAGtiAAvgnNsi
                    +n + e   D                  d+ gHGT VAG iA+ ++   
   mKIAA0091   240 RTNwTNERTLD------------------DGLGHGTFVAGVIASMRE--- 268  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   gvvGVApgAkllavrvLdgpngsgtseleaasywaasaviagiewaandn
                      G Ap+A+l + rv+ + ++s+t           s+  +++++a+   
   mKIAA0091   269 -CQGFAPDAELHIFRVFTNNQVSYT-----------SWFLDAFNYAI-LK 305  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   gadvinmSlGggfpgdsGstsdgpgdlakkAllegAvnyArvnkGsifVa
                   ++dv n S Gg      + ++d       + +++  v +  +++++i V 
   mKIAA0091   306 KMDVLNLSIGG------PDFMD-------HPFVDK-VWEL-TANNVIMVS 340  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   
                   AAGNeGsdasdscgcdgnyfrslvkKvvsPAnsiytnvIaVGAtdqn...
                   A GN+G+  +++   ++            PA      vI VG++d++++ 
   mKIAA0091   341 AIGNDGPL-YGTL--NN------------PADQM--DVIGVGGIDFEdni 373  

                RF   xxxxxxxxxxxxxxx           xxxxxxxxxxxxxxxxxxxxxx
                   ..fssnsglavdisAPG...........evnIlSTdlqdsgaliynnggy
                    +fss  ++ +++   G ++ +++  + ++ +            +  gg 
   mKIAA0091   374 arFSSRGMTTWELPG-GygrvkpdivtyGAGVRGS---------GVKGGC 413  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   aslsGTSMAaPhvAGvaALllsanspnltWrdvqylsvlsesaaelraal
                     lsGTS A+P vAG+++Ll s           q + +   ++a +++al
   mKIAA0091   414 RALSGTSVASPVVAGAVTLLVSTV---------QKRELV--NPASVKQAL 452  

                RF xxxxxxxxxxxxxxxxxxx   
                   entatslggagisnlfGyG<-*
                   +  a  l g    + +G+G   
   mKIAA0091   453 IASARRLPGVNM-FEQGHG    470  

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