hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh01670/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0080  ( 353 res)   mbh01670

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       C2 domain                                      216.3    4.5e-61   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/2      96   184 ..     1    88 []   116.4  5.4e-31
C2         2/2     230   319 ..     1    88 []   104.6  1.9e-27

Alignments of top-scoring domains:
C2: domain 1 of 2, from 96 to 184: score 116.4, E = 5.4e-31
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkdqkkkTkvikktl
                      L+Vt+ eA++Lp +D+ +  sDPY k+++++dk+ ++ kT+v +ktl
   mKIAA0080    96    LVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKR-HRVKTRVLRKTL 141  

                   NPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   +Pv++EtFtF+ +p+ +lq+ +L++ V  +drf+rdd++Gev    
   mKIAA0080   142 DPVFDETFTFYvIPYSQLQDlVLHFLVLSFDRFSRDDVIGEVM    184  

C2: domain 2 of 2, from 230 to 319: score 104.6, E = 1.9e-27
                   *->LrVtvieAknLppkDfkng.ksDPYVkvslggdkkd.qkkkTkvikk
                      ++V v++A++Lp++D ++g + +PYVkv +   +k+  kkkT+v+k 
   mKIAA0080   230    MTVVVLKARHLPKMD-ITGlSGNPYVKVNVYYGRKRiAKKKTHVKKC 275  

                   tlNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   tlNPv+NE+F +++p + l + ++e+ V D+dr ++++++G+ +   
   mKIAA0080   276 TLNPVFNESFIYDIPTDLLPDiSIEFLVIDFDRTTKNEVVGRLI    319  

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