hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05150/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0075  ( 321 res)   mpm05150

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
E2F_TDP  E2F/DP family winged-helix DNA-binding domai   138.2    1.5e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
E2F_TDP    1/1      34    99 ..     1    87 []   138.2  1.5e-37

Alignments of top-scoring domains:
E2F_TDP: domain 1 of 1, from 34 to 99: score 138.2, E = 1.5e-37
                   *->RkekSLglLtqkFlklleksedkgivdLnevAkeLvsefadsnnhaq
                      R+++SLglLt+kF++ll++s+d g++dLn++A+ L            
   mKIAA0075    34    RYDTSLGLLTKKFIQLLSQSPD-GVLDLNKAAEVL------------ 67   

                   eYdvknqkRRiYDItNVLegiglIeKtHvlksKneirWkG<-*
                     +v  qkRRiYDItNVLegi+lI+K    ksKn+++W+G   
   mKIAA0075    68 --KV--QKRRIYDITNVLEGIHLIKK----KSKNNVQWMG    99   

//