hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mnh/mnh02088/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0060  ( 274 res)   mnh02088

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Glucosamine_iso Glucosamine-6-phosphate isomerases/6-   636.0   2.1e-187   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Glucosamine_iso   1/1       1   235 [.     1   238 []   636.0 2.1e-187

Alignments of top-scoring domains:
Glucosamine_iso: domain 1 of 1, from 1 to 235: score 636.0, E = 2.1e-187
                   *->waAkyIinrInsfkPtaerpFvLGLPTGstPlgiYkkLielykaGkv
                       aAkyI+nrI++f+P+++++F+LGLPTGstPlg+Y+kLie+yk+G++
   mKIAA0060     1    -AAKYIRNRIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDL 46   

                   SFKhVvTFNMDEYvGLpkehpeSYhsFMynnFFnHiDIppENihiLnGnA
                   SF +V+TFNMDEYvGLp++hpeSYhsFM+nnFF+HiDI+pEN+hiL+GnA
   mKIAA0060    47 SFQYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNA 96   

                   adidaECrnYEeKIksyGkIdLFlGGvGpdGHiAFNEpgSSlaSrTRikt
                   ad++aEC+++EeKI+++G+I+LF+GG+GpdGHiAFNEpgSSl+SrTR+kt
   mKIAA0060    97 ADLQAECDAFEEKIQAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKT 146  

                   LtedTilANsRFFdndvtkVPkyALtVGvgTlLDnaeEvmIlvlGkqKal
                   L++dTilAN+RFFd+d+ kVP++ALtVGvgT++D a+EvmIl++G++Ka+
   mKIAA0060   147 LAMDTILANARFFDGDLAKVPTMALTVGVGTVMD-AKEVMILITGAHKAF 195  

                   ALqkavegkvNdhmwtvSaLQdHpkvllVCDedAtleLKvK<-*
                   AL+ka+e++vN hmwtvSa+Q+Hp++++VCDedAtleLKvK   
   mKIAA0060   196 ALYKAIEEGVN-HMWTVSAFQQHPRTVFVCDEDATLELKVK    235  

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