hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj00763/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0056  ( 1505 res)   mfj00763

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     46.6    5.5e-10   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/7     350   385 ..     1    36 []     5.0       48
HEAT       2/7     441   475 ..     1    36 []     8.5       16
HEAT       3/7     531   566 ..     1    36 []    16.5     0.64
HEAT       4/7     573   604 ..     1    36 []    13.0      3.6
HEAT       5/7     613   644 ..     1    36 []     1.6  1.5e+02
HEAT       6/7     929   966 ..     1    36 []     4.2       62
HEAT       7/7     967  1003 ..     1    36 []    12.0      5.1

Alignments of top-scoring domains:
HEAT: domain 1 of 7, from 350 to 385: score 5.0, E = 48
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++l +ll++++    D+  e R  Aa++L++l+ +l   
   mKIAA0056   350    YpVLGTLLQHICAKVVDKA-EYRTYAAQSLVQLLTKL    385  

HEAT: domain 2 of 7, from 441 to 475: score 8.5, E = 16
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++   + +++++ + D+ p VR  A++++++ +e     
   mKIAA0056   441    HkFF--VQEIIFDRCLDKAPTVRSKALSSFAHCLELS    475  

HEAT: domain 3 of 7, from 531 to 566: score 16.5, E = 0.64
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       + +  ++ +l k ++D+  +VR++A++ L ++++++   
   mKIAA0056   531    PgER-CFMTMLRKRIKDEKINVRKSALQVLMSILKHC    566  

HEAT: domain 4 of 7, from 573 to 604: score 13.0, E = 3.6
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++ll     +l+++++Dp  +VR++A+++L +l+      
   mKIAA0056   573    QdLL-----ILQDHCRDPAISVRKQALQSLTELVMAQ    604  

HEAT: domain 5 of 7, from 613 to 644: score 1.6, E = 1.5e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + l+      ++    D ++ V+e A+e+L +l+ +    
   mKIAA0056   613    AwLM-----GVIPVVMDCESTVQEKALECLDQLLLQN    644  

HEAT: domain 6 of 7, from 929 to 966: score 4.2, E = 62
                   *->e.lldellplllklln.DpdpeVReaAaeaLgalaevl<-*
                      e+l ++ +p+l++ l+ ++d  VR +++  +++l+  +   
   mKIAA0056   929    EdLAKKSIPALVRELEvSEDVAVRNNVIIVICDLCIRY    966  

HEAT: domain 7 of 7, from 967 to 1003: score 12.0, E = 5.1
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                         +d+ +p +  +l+D+dp +R++++  L +l++     
   mKIAA0056   967    TvMVDNYIPNISVCLKDSDPFIRKQTLVLLTNLLQEE    1003 

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