hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg05393/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0032  ( 938 res)   mbg05393

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   536.0   1.6e-156   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1     609   938 .]     1   407 []   536.0 1.6e-156

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 609 to 938: score 536.0, E = 1.6e-156
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      ++s++dLkk+    L+++f      +gEeg+D+GGvt+EFf ll+ke
   mKIAA0032   609    IHSDIDLKKP----LKVIF------DGEEGVDAGGVTKEFFLLLLKE 645  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   l+np +yg+F+y++++n              lL+++ +++++++      
   mKIAA0032   646 LLNP-IYGMFTYYQDSN--------------LLWFSDTCFVEHN------ 674  

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   +F++iG+ +G+A+y+++ +Dl+F++++yKkLL+++    ++l+Dl++l P
   mKIAA0032   675 WFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVK----PSLEDLKELSP 720  

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                     ++sL++L                   l++ ++++e+ ++L+F+++ es
   mKIAA0032   721 TEGRSLQEL-------------------LDYPGEDIEETFCLNFTVCRES 751  

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    +g+ ++  L+pGG+ + V+++N++E+V+ +++y+++ +v++++ AF +G
   mKIAA0032   752 -YGVIEQKKLIPGGDRVAVCKDNRQEFVDAYVNYIFQISVHEWYTAFSSG 800  

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F++V+  + L+ lF++ EL+ ++ G++ ++d+++L+++++yrg+Y+ +++
   mKIAA0032   801 FLKVCGGKVLE-LFQPAELRAMMVGNS-NYDWEELEETAVYRGDYSSTHP 848  

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   t+   k+FWe++++F  e+++k+L F+TGs+r+P  ++G+a+L       
   mKIAA0032   849 TV---KLFWETFHEFPLEKKKKFLLFLTGSDRIP--IYGMASL------- 886  

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                   +++I+   +    ++++LP AhTC+N+L+LP+YsSkei++ +L +A  ++
   mKIAA0032   887 QIIIQSTAT----GEEYLPVAHTCYNLLDLPKYSSKEIMKARLTQALDNY 932  

                   RiggeGFgls<-*
                       eGF+l+   
   mKIAA0032   933 ----EGFSLA    938  

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