hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01752/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0010  ( 1086 res)   mbg01752

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECT     HECT-domain (ubiquitin-transferase)            429.7   2.7e-125   1
IQ       IQ calmodulin-binding motif                     20.7      0.035   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IQ         1/1      49    69 ..     1    21 []    20.7    0.035
HECT       1/1     781  1086 .]     1   366 []   429.7 2.7e-125

Alignments of top-scoring domains:
IQ: domain 1 of 1, from 49 to 69: score 20.7, E = 0.035
                   *->rraaikIQaawRGylaRkryk<-*
                       + a++IQ+++RGy+ Rk+     
   mKIAA0010    49    LKNAVIIQSFIRGYRDRKQQY    69   

HECT: domain 1 of 1, from 781 to 1086: score 429.7, E = 2.7e-125
                   *->tLlsrelfnPdygLFeysdnseakseeddsysgyvedsytlfpnPls
                      + l +  fnP+ g+F                   +++   l+pnP  
   mKIAA0010   781    NELLKSGFNPNQGFFK------------------TTNEGLLYPNPAA 809  

                   g.esnpehervlkyFkflGrilGlAlydgrllDlpFsraFyKklLmagkp
                        ++      +++flGr+lG+Aly++ l++lpF+ +F+ klL  g +
   mKIAA0010   810 QmLVGDSF---ARHYYFLGRMLGKALYENMLVELPFAGFFLSKLL--GTS 854  

                   sigivtleDlesvDPelynSLkwllendgdKkIedsLLgsledveedLeL
                      +v+++ l+s+DPe+y++L  l++++ d              +e+L+L
   mKIAA0010   855 --ADVDIHHLASLDPEVYRNLLFLKSYEED--------------VEELGL 888  

                   tFsveeessvgfeadarffGgtktveELkPnGrnipVTneNkeeYvelyv
                   +F+v  ++   +       G+ ++ve Lk +G++ipVT +N++ Y++l++
   mKIAA0010   889 NFTVVNND---L-------GEAQVVE-LKFGGKDIPVTGANRIAYIHLVA 927  

                   dyrLnkgiekQfeAFrkGFsevipsrlLslFdpeELelLicGspee.iDv
                   dyrLnk+i++++ AFr+G+  v+++++L++Fd +E++ Li+G +  ++++
   mKIAA0010   928 DYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQ-VpVSL 976  

                   ddLkenTeYdggYtedsplktiqwFWevleeftneeraklLqFvTGssRl
                   +dLk++T Y ggY++d+p  +i+ FW+v+e+ft+ee++klL+FvT++sR+
   mKIAA0010   977 EDLKSFTNYSGGYSADHP--VIKIFWRVVEGFTDEEKRKLLKFVTSCSRP 1024 

                   PvgGFkaLqgGsnGpPkFtIvrkegggdddrLPtAhTCFNrLkLPpYsSk
                   P++GFk+L+      P F+I++   g d +rLPtA+TC+N+LkLP+    
   mKIAA0010  1025 PLLGFKELY------PAFCIHNG--GSDLERLPTASTCMNLLKLPEFYDE 1066 

                   eiLrekLllAInEgseGFgle<-*
                     Lr+kLl+AI E+ +GF+l+   
   mKIAA0010  1067 ALLRSKLLYAI-ECAAGFELS    1086 

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