hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mlj/mlj04062/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00370  ( 499 res)   mlj04062

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PLDc     Phospholipase D. Active site motifs.            83.2    3.1e-20   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PLDc       1/2     203   230 ..     1    30 []    51.5  1.1e-10
PLDc       2/2     417   443 ..     1    30 []    34.8  1.1e-05

Alignments of top-scoring domains:
PLDc: domain 1 of 2, from 203 to 230: score 51.5, E = 1.1e-10
                   *->ydgvlHtKlmivDderkiafiGsaNldgrs<-*
                      ++gvlH+K+++vD++  ++++GsaN+d+rs   
   mFLJ00370   203    TGGVLHSKFWVVDGR--HVYVGSANMDWRS    230  

PLDc: domain 2 of 2, from 417 to 443: score 34.8, E = 1.1e-05
                   *->ydgvlHtKlmivDderkiafiGsaNldgrs<-*
                      + +v+H+K+m+ D+   +a++G++N++ ++   
   mFLJ00370   417    FSRVNHSKFMVTDK---TAYVGTSNWSEDY    443  

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