hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph03762/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00346  ( 1128 res)   mph03762

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Ded_cyto Dedicator of cytokinesis                       411.0   1.1e-119   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Ded_cyto   1/1     911  1090 ..     1   192 []   411.0 1.1e-119

Alignments of top-scoring domains:
Ded_cyto: domain 1 of 1, from 911 to 1090: score 411.0, E = 1.1e-119
                   *->tyFernnnvrrFmyetPFTknGtAtkaQGeleEQwKRkTiLttensF
                      tyFe+n+n+rrFmy+tPFT++G   +++Gel+EQ +R+T+Ltt+++F
   mFLJ00346   911    TYFEKNFNLRRFMYTTPFTLEG---RPRGELHEQHRRNTVLTTMHAF 954  

                   PyiktRilVisreeielsPIEVAIedIqkKtaeLaaainqppadtlpdik
                   PyiktRi V ++ee++l+PIEVAIed++kKt++La+a++q+p    pd+k
   mFLJ00346   955 PYIKTRIRVSQKEEFVLTPIEVAIEDMKKKTLQLAVATHQEP----PDAK 1000 

                   mLQmvLQGSVgvtVNaGPLevAraFLseepLkadplGrPpdkhinkLrlv
                   mLQmvLQGSVg+tVN+GPLevA++FL+e+p  adp+   +++h+nkLrl+
   mFLJ00346  1001 MLQMVLQGSVGATVNQGPLEVAQVFLAEIP--ADPK---LYRHHNKLRLC 1045 

                   freFikrCkrALevnkrLIgeDQkEYqreLkeNYekLkeeLsplI<-*
                   f+eFi+rC++A+e+n+rLI+++Q+EYq+eLk+NY+kL+  L+p+I   
   mFLJ00346  1046 FKEFIMRCGEAVEKNRRLITAEQREYQQELKKNYNKLRDSLRPMI    1090 

//