hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg09763/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00311  ( 285 res)   mbg09763

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
G_glu_transpept Gamma-glutamyltranspeptidase            -98.9    2.9e-10   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
G_glu_transpept   1/1       2   285 .]     1   554 []   -98.9  2.9e-10

Alignments of top-scoring domains:
G_glu_transpept: domain 1 of 1, from 2 to 285: score -98.9, E = 2.9e-10
                   *->aeiLrkGGNAvDAAVAaalcLgVVePhssGIGGGgFmliydaktgkv
                                                               a+ ++ 
   mFLJ00311     2    -----------------------------------------ARAQSQ 7    

                   laiFDaREtAPaaAtkdmfldkdgngdpklsktGglavgVPGevaGleea
                    ++                      + +                      
   mFLJ00311     8 -SL-------------------SSHPPDP--------------------- 16   

                   hkryGSGrLpwadLlePAIkLArdGFpVsprlaaalalaeerflradpgl
                        S     + +l+P  +  +      pr a+ala++ +   ++d  l
   mFLJ00311    17 -----S-----SPVLAPPTQPLH-----LPRAAHALAEQLPP-NASDRFL 50   

                   akiFlpptGkpppkaGdllkqPdLAkTLelIAeseGpeaFYrG.elAeal
                    + Flp  G p p +G+ll++PdLA++L+++++ +Gp+aFY+G+ l+ ++
   mFLJ00311    51 -DTFLP-LGHP-PLPGSLLRRPDLAEVLDILGT-SGPAAFYNGgNLTLEM 96   

                   vadlqasnGGiiTleDLanYkvevrePlsgdYfrg...............
                   va++q+ +GG+iT+eD++nY++  ++P++g Y rg+ +++++ ++  + +
   mFLJ00311    97 VAEAQH-AGGVITEEDFSNYSALTEKPVCGVY-RGdlspsspfqsicsfp 144  

                   ...gytvyepPPsSgGivllqiLniLegfdflkslglgsgesdpdsaeyv
                     +g+ v +pPP++ G++l+ +LniLegf+ l+sl  +         +++
   mFLJ00311   145 ilsGHLVLSPPPPHTGPALISALNILEGFN-LTSLVSR--------EQAL 185  

                   HllvEAmKlAyadRtrYLGDPdFvpvp.elvenLLskeYakerralInpd
                   H+++E++K+A a ++r LGDP + + ++e+++++Lsk  a+  r +I+++
   mFLJ00311   186 HWVAETLKIALALASR-LGDPVYDSTItESMDDMLSKVEAANFRGHISDS 234  

                   aatpsppgppgp.dplPAssyygaapaapetdggTtHfsVvDrdGNaVSa
                   +a p+p+ p+++ d+                 +  +++ V+ +d  +V++
   mFLJ00311   235 QAAPAPLLPVYElDG----------------APTAAQVLVMGPDDFIVAM 268  

                   TsTinlgFGSgvvvpgTGilLNNemdDFsatPGvpNafglapshaNaieP
                    s++n +FGSg+++p             s                     
   mFLJ00311   269 VSSLNRPFGSGLLTP-------------S--------------------- 284  

                   GKRPlSSmsPtivlkkdGkpvlyvvGapGGsrIiqavlqvivnvldfgmn
                                                                     
   mFLJ00311     - -------------------------------------------------- -    

                   lqeAvdaPRfhhdagpgQllPdvvevEpfgfpeevlaeLearGHkvkvvp
                                                                     
   mFLJ00311     - -------------------------------------------------- -    

                   vssgvgaiiivdkeggvlygasDpRrdG<-*
                                              G   
   mFLJ00311   285 ---------------------------G    285  

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