hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mtg/mtg01156/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00307  ( 516 res)   mtg01156

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       Protein kinase C conserved region 2 (CalB)      64.2    1.7e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/1     334   439 ..     1    92 []    64.2  1.7e-14

Alignments of top-scoring domains:
C2: domain 1 of 1, from 334 to 439: score 64.2, E = 1.7e-14
                   *->tLtvkiisArnLp.........DPYVkvs...........kTkvvkk
                      +L++ i+ ++nL  +  ++++ +PYVk +  +++++++++kT+v k+
   mFLJ00307   334    SLEICIKTCKNLAygeekkrkcNPYVKTYllpdrssqgkrKTRVQKN 380  

                   tlsgfNPvWnEesetFeFevpp.....s.LeieVyDk......dfiGrvt
                   tl    P+++E   t+++ v+p++  +++L+++V++ ++  ++ f+G+v+
   mFLJ00307   381 TL---DPTFEE---TLKYQVDPgqlmtRrLQVSVWHLgtlarrVFLGEVI 424  

                   ippnnahqhsadglihlsell.ggrh.kl<-*
                   +p              l   +  + + ++   
   mFLJ00307   425 LP--------------LAMWDfKDSTaQN    439  

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