hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph01963/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00144  ( 413 res)   mph01963

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF1625  Protein of unknown function (DUF1625)          635.9   2.2e-187   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF1625    1/1     134   386 ..     1   265 []   635.9 2.2e-187

Alignments of top-scoring domains:
DUF1625: domain 1 of 1, from 134 to 386: score 635.9, E = 2.2e-187
                   *->MYQWVEeskSrtykesGgtTektETTYSYntEWRdeiIdSrnFdkev
                      MYQWVE+++S +y+e+G++  k+ET YSYntEWR+ei++SrnFd+e+
   mFLJ00144   134    MYQWVETEESSEYTEDGQV--KKETKYSYNTEWRSEIVNSRNFDREI 178  

                   GHkNPSeMAiESrvvvAPaVkiGrFeLstgvldkidnfkeLSLSalpeps
                   GHkNPS+MA+ES++++AP+V+iGrF+Ls+g++dkidnfk+LSL +l++p+
   mFLJ00144   179 GHKNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPH 228  

                   ikaAYTGTKPlkirdgiyYHtndpktPEVGDlRvlFsyAGLsGddldlGs
                   ++        +++r++++YH+++pk+PEVGD+Rv+FsyAGLs dd+dlG+
   mFLJ00144   229 VD--------IIRRGDFFYHSENPKYPEVGDVRVSFSYAGLSSDDPDLGP 270  

                   AHVVSVVArQaGsqLvPysTksGdtLLLvytGnlsAeEvFakEvraNsLk
                   AHVV+V+ArQ+G+qL PysTksGdtLLL+++G++sAeEvF++E ++Ns+k
   mFLJ00144   271 AHVVTVIARQRGDQLIPYSTKSGDTLLLLHHGDFSAEEVFRREQKSNSMK 320  

                   TWlLRaaGwlLmFlGvaLfTrilrtLvdrvPlLgsLarvGlkifaGNlci
                   TW+LRaaGw++mF+G++L+Tril+tLvd++P++++L+++Glk+fa  +c+
   mFLJ00144   321 TWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIGLKAFA--FCV 368  

                   AiSLaLltiAaaWiyYRP<-*
                   A+SL+Llt+Aa+W++YRP   
   mFLJ00144   369 ATSLTLLTVAAGWLFYRP    386  

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