hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj57291/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00095  ( 200 res)   mfj57291

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DnaJ     DnaJ domain                                    133.4    4.1e-36   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DnaJ       1/1      17    82 ..     1    79 []   133.4  4.1e-36

Alignments of top-scoring domains:
DnaJ: domain 1 of 1, from 17 to 82: score 133.4, E = 4.1e-36
                   *->dyYeiLGvprdAsdeeIKKAYRkLAlkyHPDKNpgdpeerktlerae
                       +Y +LG++++A+ ++IKK+YRkLAlkyHPDKNp++p          
   mFLJ00095    17    SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNP---------- 53   

                   skeeAeekFkeineAYevLsDpekRaiYDqyg<-*
                      eA++kFkein A+ +L+D +kR iYD+yg   
   mFLJ00095    54 ---EAADKFKEINNAHAILTDATKRNIYDKYG    82   

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