hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mej/mej02415/w3open/interpro/cnk_1/seq.in
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Query:  mFLJ00042  ( 498 res)   mej02415

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
EFh      EF-hand, calcium binding motif                  26.8      0.003   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
EFh        1/2      66    94 ..     1    29 []     6.8       23
EFh        2/2     186   214 ..     1    29 []    20.0     0.34

Alignments of top-scoring domains:
EFh: domain 1 of 2, from 66 to 94: score 6.8, E = 23
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       l ++Fr+ D+D+d  ++ eE+ a+ ks+   
   mFLJ00042    66    ALTRIFRLSDQDRDHGLSDEELNAFQKSC    94   

EFh: domain 2 of 2, from 186 to 214: score 20.0, E = 0.34
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       ++++F++ D+D+dG +++ E++ l++ +   
   mFLJ00042   186    FVQRMFEKHDQDHDGVLSPTELQNLFSVF    214  

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