# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtk02569.fasta.nr -Q ../query/mKIAA1332.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1332, 412 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915413 sequences Expectation_n fit: rho(ln(x))= 6.5030+/-0.000197; mu= 5.7207+/- 0.011 mean_var=120.7246+/-23.085, 0's: 29 Z-trim: 36 B-trim: 0 in 0/67 Lambda= 0.116728 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74222442|dbj|BAE38121.1| unnamed protein produc ( 705) 2821 485.9 1.2e-134 gi|51701399|sp|Q6PDJ6.1|FBX42_MOUSE RecName: Full= ( 717) 2821 485.9 1.2e-134 gi|26324812|dbj|BAC26160.1| unnamed protein produc ( 717) 2821 485.9 1.2e-134 gi|74178160|dbj|BAE29867.1| unnamed protein produc ( 705) 2813 484.6 3.1e-134 gi|74195781|dbj|BAE30454.1| unnamed protein produc ( 705) 2813 484.6 3.1e-134 gi|13278259|gb|AAH03960.1| Fbxo42 protein [Mus mus ( 555) 2809 483.8 4.2e-134 gi|74206782|dbj|BAE41632.1| unnamed protein produc ( 717) 2801 482.5 1.3e-133 gi|13544089|gb|AAH06174.1| FBXO42 protein [Homo sa ( 513) 2697 464.9 1.9e-128 gi|114554242|ref|XP_001153263.1| PREDICTED: F-box ( 624) 2697 465.0 2.2e-128 gi|114554240|ref|XP_001153323.1| PREDICTED: F-box ( 678) 2697 465.0 2.3e-128 gi|193786259|dbj|BAG51542.1| unnamed protein produ ( 717) 2697 465.0 2.4e-128 gi|51701398|sp|Q6P3S6.1|FBX42_HUMAN RecName: Full= ( 717) 2695 464.7 3e-128 gi|108997922|ref|XP_001086223.1| PREDICTED: F-box ( 623) 2688 463.5 6.2e-128 gi|108997919|ref|XP_001086349.1| PREDICTED: F-box ( 677) 2688 463.5 6.6e-128 gi|73950842|ref|XP_864882.1| PREDICTED: similar to ( 678) 2688 463.5 6.6e-128 gi|108997916|ref|XP_001086461.1| PREDICTED: F-box ( 716) 2688 463.5 6.9e-128 gi|73950838|ref|XP_852026.1| PREDICTED: similar to ( 717) 2688 463.5 6.9e-128 gi|61212956|sp|Q5RDA9.1|FBX42_PONAB RecName: Full= ( 717) 2686 463.2 8.7e-128 gi|27696695|gb|AAH43410.1| F-box protein 42 [Homo ( 716) 2682 462.5 1.4e-127 gi|119888886|ref|XP_001254174.1| PREDICTED: simila ( 717) 2650 457.1 5.8e-126 gi|73950834|ref|XP_535394.2| PREDICTED: similar to ( 401) 2609 450.0 4.5e-124 gi|194207994|ref|XP_001488712.2| PREDICTED: simila ( 714) 2599 448.5 2.2e-123 gi|126328915|ref|XP_001365910.1| PREDICTED: hypoth ( 717) 2599 448.5 2.2e-123 gi|149592747|ref|XP_001521623.1| PREDICTED: simila ( 549) 2591 447.1 4.7e-123 gi|148681402|gb|EDL13349.1| F-box protein 42, isof ( 714) 2489 430.0 8.4e-118 gi|21739374|emb|CAD38731.1| hypothetical protein [ ( 366) 2335 403.8 3.3e-110 gi|74137111|dbj|BAE42319.1| unnamed protein produc ( 613) 2101 364.6 3.5e-98 gi|149024473|gb|EDL80970.1| F-box protein 42 (pred ( 320) 2089 362.4 8.7e-98 gi|56203757|emb|CAI22561.1| F-box protein 42 [Homo ( 299) 1794 312.7 7.4e-83 gi|118101142|ref|XP_417619.2| PREDICTED: similar t ( 704) 1646 288.0 4.5e-75 gi|73950836|ref|XP_864826.1| PREDICTED: similar to ( 649) 1127 200.6 8.7e-49 gi|51950075|gb|AAH82451.1| MGC84191 protein [Xenop ( 690) 939 169.0 3.1e-39 gi|31419600|gb|AAH53311.1| F-box protein 42 [Danio ( 619) 629 116.7 1.5e-23 gi|209156198|gb|ACI34331.1| F-box only protein 42 ( 736) 592 110.5 1.3e-21 gi|47229660|emb|CAG06856.1| unnamed protein produc ( 519) 529 99.8 1.5e-18 gi|21595421|gb|AAH32439.1| FBXO42 protein [Homo sa ( 61) 396 76.7 1.7e-12 gi|210127852|gb|EEA75532.1| hypothetical protein B ( 843) 283 58.6 6.5e-06 gi|212517905|gb|EEB19734.1| F-box protein, putativ ( 580) 240 51.2 0.00074 gi|218188985|gb|EEC71412.1| hypothetical protein O ( 625) 221 48.0 0.0072 gi|157013041|gb|EAA00139.4| AGAP012367-PA [Anophel ( 649) 221 48.0 0.0074 gi|190621491|gb|EDV37015.1| GF11651 [Drosophila an ( 664) 220 47.9 0.0085 gi|156553929|ref|XP_001602114.1| PREDICTED: simila ( 517) 217 47.3 0.0099 >>gi|74222442|dbj|BAE38121.1| unnamed protein product [M (705 aa) initn: 2821 init1: 2821 opt: 2821 Z-score: 2573.4 bits: 485.9 E(): 1.2e-134 Smith-Waterman score: 2821; 100.000% identity (100.000% similar) in 412 aa overlap (1-412:294-705) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|742 SGPSPHPRGGQSQIVTDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 450 460 470 480 490 500 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 510 520 530 540 550 560 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 570 580 590 600 610 620 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 630 640 650 660 670 680 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|742 DKKQNVKYYPKTNALYFVRAKR 690 700 >>gi|51701399|sp|Q6PDJ6.1|FBX42_MOUSE RecName: Full=F-bo (717 aa) initn: 2821 init1: 2821 opt: 2821 Z-score: 2573.3 bits: 485.9 E(): 1.2e-134 Smith-Waterman score: 2821; 100.000% identity (100.000% similar) in 412 aa overlap (1-412:306-717) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|517 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 520 530 540 550 560 570 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 640 650 660 670 680 690 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|517 DKKQNVKYYPKTNALYFVRAKR 700 710 >>gi|26324812|dbj|BAC26160.1| unnamed protein product [M (717 aa) initn: 2821 init1: 2821 opt: 2821 Z-score: 2573.3 bits: 485.9 E(): 1.2e-134 Smith-Waterman score: 2821; 100.000% identity (100.000% similar) in 412 aa overlap (1-412:306-717) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|263 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 520 530 540 550 560 570 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 640 650 660 670 680 690 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|263 DKKQNVKYYPKTNALYFVRAKR 700 710 >>gi|74178160|dbj|BAE29867.1| unnamed protein product [M (705 aa) initn: 2813 init1: 2813 opt: 2813 Z-score: 2566.2 bits: 484.6 E(): 3.1e-134 Smith-Waterman score: 2813; 99.757% identity (99.757% similar) in 412 aa overlap (1-412:294-705) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|741 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|741 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQYDLRLSSIDLNWDLKSASSSSHV 450 460 470 480 490 500 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 510 520 530 540 550 560 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 570 580 590 600 610 620 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 630 640 650 660 670 680 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|741 DKKQNVKYYPKTNALYFVRAKR 690 700 >>gi|74195781|dbj|BAE30454.1| unnamed protein product [M (705 aa) initn: 2813 init1: 2813 opt: 2813 Z-score: 2566.2 bits: 484.6 E(): 3.1e-134 Smith-Waterman score: 2813; 99.757% identity (99.757% similar) in 412 aa overlap (1-412:294-705) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|741 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 450 460 470 480 490 500 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 510 520 530 540 550 560 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 570 580 590 600 610 620 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|741 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIEFGGLM 630 640 650 660 670 680 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|741 DKKQNVKYYPKTNALYFVRAKR 690 700 >>gi|13278259|gb|AAH03960.1| Fbxo42 protein [Mus musculu (555 aa) initn: 2809 init1: 2809 opt: 2809 Z-score: 2563.9 bits: 483.8 E(): 4.2e-134 Smith-Waterman score: 2809; 99.515% identity (99.515% similar) in 412 aa overlap (1-412:144-555) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG :::::::::::::::::::::::::::::: gi|132 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHG 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 180 190 200 210 220 230 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 240 250 260 270 280 290 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 300 310 320 330 340 350 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 DSTDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 360 370 380 390 400 410 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|132 ALSPPLGSSPSSPGSQSLSSGETVPNPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 420 430 440 450 460 470 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 480 490 500 510 520 530 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|132 DKKQNVKYYPKTNALYFVRAKR 540 550 >>gi|74206782|dbj|BAE41632.1| unnamed protein product [M (717 aa) initn: 2801 init1: 2801 opt: 2801 Z-score: 2555.1 bits: 482.5 E(): 1.3e-133 Smith-Waterman score: 2801; 99.272% identity (99.272% similar) in 412 aa overlap (1-412:306-717) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG ::::::::::::::::::::::: :::::: gi|742 SGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKEENEDHG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DSTDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 520 530 540 550 560 570 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|742 ALSPPLGSSPSSPGSQSLSSGETVPNPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM 640 650 660 670 680 690 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|742 DKKQNVKYYPKTNALYFVRAKR 700 710 >>gi|13544089|gb|AAH06174.1| FBXO42 protein [Homo sapien (513 aa) initn: 2697 init1: 2697 opt: 2697 Z-score: 2462.5 bits: 464.9 E(): 1.9e-128 Smith-Waterman score: 2697; 94.175% identity (98.786% similar) in 412 aa overlap (1-412:102-513) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG ::::::::::::: :::::::::::::.:: gi|135 SGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::.: gi|135 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSS 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV ::::::..:::::::..:::::.:::::::::::::::::::.::::::::: ::::. . gi|135 LDSPVQAISPSTPSAAEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPM 260 270 280 290 300 310 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :..:::::.::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|135 DGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 320 330 340 350 360 370 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL ::::::::::.:::::::::::::: ::::::::::::::::::::::::::::::::: gi|135 ALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 380 390 400 410 420 430 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM ::::::::::::::::::::::::::::::.:::::::::::::::::::::::.::::: gi|135 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLM 440 450 460 470 480 490 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|135 DKKQNVKYYPKTNALYFVRAKR 500 510 >>gi|114554242|ref|XP_001153263.1| PREDICTED: F-box prot (624 aa) initn: 2697 init1: 2697 opt: 2697 Z-score: 2461.3 bits: 465.0 E(): 2.2e-128 Smith-Waterman score: 2697; 94.175% identity (98.786% similar) in 412 aa overlap (1-412:213-624) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG ::::::::::::: :::::::::::::.:: gi|114 SGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHG 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::.: gi|114 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSS 310 320 330 340 350 360 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV ::::::..:::::::..:::::.:::::::::::::::::::.::::::::: ::::. . gi|114 LDSPVQAISPSTPSAAEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPM 370 380 390 400 410 420 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :..:::::.::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 430 440 450 460 470 480 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL ::::::::::.:::::::::::::: ::::::::::::::::::::::::::::::::: gi|114 ALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 490 500 510 520 530 540 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM ::::::::::::::::::::::::::::::.:::::::::::::::::::::::.::::: gi|114 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLM 550 560 570 580 590 600 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|114 DKKQNVKYYPKTNALYFVRAKR 610 620 >>gi|114554240|ref|XP_001153323.1| PREDICTED: F-box prot (678 aa) initn: 2697 init1: 2697 opt: 2697 Z-score: 2460.8 bits: 465.0 E(): 2.3e-128 Smith-Waterman score: 2697; 94.175% identity (98.786% similar) in 412 aa overlap (1-412:267-678) 10 20 30 mKIAA1 NALFKDAWLLHMHPGPWAWQPLKVENEDHG ::::::::::::: :::::::::::::.:: gi|114 SGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHG 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA1 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPV 300 310 320 330 340 350 100 110 120 130 140 150 mKIAA1 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGAS :::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::.: gi|114 RSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSS 360 370 380 390 400 410 160 170 180 190 200 210 mKIAA1 LDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHV ::::::..:::::::..:::::.:::::::::::::::::::.::::::::: ::::. . gi|114 LDSPVQAISPSTPSAAEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPM 420 430 440 450 460 470 220 230 240 250 260 270 mKIAA1 DSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA :..:::::.::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASA 480 490 500 510 520 530 280 290 300 310 320 330 mKIAA1 ALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL ::::::::::.:::::::::::::: ::::::::::::::::::::::::::::::::: gi|114 ALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL 540 550 560 570 580 590 340 350 360 370 380 390 mKIAA1 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLM ::::::::::::::::::::::::::::::.:::::::::::::::::::::::.::::: gi|114 YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLM 600 610 620 630 640 650 400 410 mKIAA1 DKKQNVKYYPKTNALYFVRAKR :::::::::::::::::::::: gi|114 DKKQNVKYYPKTNALYFVRAKR 660 670 412 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 19:04:13 2009 done: Fri Mar 13 19:10:47 2009 Total Scan time: 891.780 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]