Comparison of KIAA cDNA sequences between mouse and human (KIAA1248)

<< Original sequence data >>

mouse  mKIAA1248 (mtk02549)     length:   1786 bp
human  hh03309a     length:   1932 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      924       838       86       9.31
  Total:      924       838       86       9.31

  3'UTR:      816       620      196      24.02

amino acid

  CDS1 :      308       293       15       4.87
  Total:      308       293       15       4.87
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     3 -   929      3 -   929      1 -   309
         human   183 -  1109      3 -  1109     61 -   369
  3'UTR: mouse   930 -  1786
         human  1110 -  1932
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 A  I  F  T  Y  H  D  V  G  L  N  Y  K  S  C  F  Q  17
mtk02549     3 GCGATATTCACCTACCATGATGTAGGCCTCAACTATAAGTCTTGCTTCCA 52
               |||||  | |||||||| ||||| || ||||||||||| |||||||||||
hh03309a   183 GCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCA 232
            61 A  I  L  T  Y  H  D  V  G  L  N  Y  K  S  C  F  Q  77

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  P  L  F  R  F  G  D  M  Q  E  I  I  Q  N  F  V  R 34
mtk02549    53 GCCACTGTTTCGGTTCGGGGATATGCAAGAGATCATACAGAACTTCGTGC 102
               ||||||||||| ||||| ||| ||||| || ||||| |||||||| ||||
hh03309a   233 GCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTCAGAACTTTGTGC 282
            78  P  L  F  Q  F  E  D  M  Q  E  I  I  Q  N  F  V  R 94

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   V  H  V  D  A  P  G  M  E  E  G  A  P  V  F  P   50
mtk02549   103 GGGTTCATGTGGATGCCCCTGGCATGGAAGAGGGGGCGCCTGTGTTTCCT 152
               |||||||||||||||||||||| ||||||||||| || |||||||| |||
hh03309a   283 GGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCT 332
            95   V  H  V  D  A  P  G  M  E  E  G  A  P  V  F  P   110

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 L  G  Y  Q  Y  P  S  L  D  Q  L  A  D  M  I  P  C  67
mtk02549   153 CTGGGATATCAGTACCCATCTCTGGACCAGCTTGCTGACATGATTCCTTG 202
                |||||||||||||||||||||||||||||||||| |||||||| |||||
hh03309a   333 TTGGGATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTG 382
           111 L  G  Y  Q  Y  P  S  L  D  Q  L  A  D  M  I  P  C  127

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  I  L  Q  Y  L  N  F  S  T  I  I  G  V  G  V  G  A 84
mtk02549   203 CATCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAG 252
               | ||||||||||||||||||||||||||||||||||||||||||||||||
hh03309a   383 CGTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAG 432
           128  V  L  Q  Y  L  N  F  S  T  I  I  G  V  G  V  G  A 144

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   G  A  Y  I  L  S  R  Y  A  L  N  H  P  D  T  V   100
mtk02549   253 CCGGAGCCTACATTCTGTCGCGATATGCTCTGAACCACCCGGACACAGTT 302
               | ||||||||||| ||| || |||||||||| |||||||||||||| |||
hh03309a   433 CTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTT 482
           145   G  A  Y  I  L  A  R  Y  A  L  N  H  P  D  T  V   160

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 E  G  L  V  L  I  N  I  D  P  N  A  K  G  W  M  D  117
mtk02549   303 GAAGGTCTTGTTCTCATCAACATTGATCCCAATGCCAAGGGCTGGATGGA 352
               ||||||||||| ||||||||||||||||||||||||||||| ||||||||
hh03309a   483 GAAGGTCTTGTCCTCATCAACATTGATCCCAATGCCAAGGGTTGGATGGA 532
           161 E  G  L  V  L  I  N  I  D  P  N  A  K  G  W  M  D  177

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  W  A  A  H  K  L  T  G  L  T  S  S  I  P  D  M  I 134
mtk02549   353 CTGGGCAGCCCACAAGTTAACTGGCCTTACGTCTTCCATTCCGGACATGA 402
                ||||||||||||||| |||| ||||| || |||||||||||||| ||||
hh03309a   533 TTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGA 582
           178  W  A  A  H  K  L  T  G  L  T  S  S  I  P  E  M  I 194

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   L  G  H  L  F  S  Q  E  E  L  S  G  N  S  E  L   150
mtk02549   403 TTCTTGGACATCTTTTCAGCCAGGAAGAGCTTTCTGGAAATTCTGAATTG 452
               | ||||||||||||||||||||||||||||| |||||||||||||| |||
hh03309a   583 TCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGTTG 632
           195   L  G  H  L  F  S  Q  E  E  L  S  G  N  S  E  L   210

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 I  Q  K  Y  R  G  I  I  Q  H  A  P  N  L  E  N  I  167
mtk02549   453 ATACAAAAGTACAGAGGTATCATCCAACACGCACCCAACCTGGAGAACAT 502
               |||||||||||||||  ||||||   ||| |||||||||||||| |||||
hh03309a   633 ATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACAT 682
           211 I  Q  K  Y  R  N  I  I  T  H  A  P  N  L  D  N  I  227

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  E  L  Y  W  N  S  Y  N  N  R  R  D  L  N  F  E  R 184
mtk02549   503 TGAACTCTACTGGAATAGCTACAACAACCGCCGAGACCTGAACTTTGAGC 552
               |||| | |||||||| ||||||||||||||||||||||||||||||||||
hh03309a   683 TGAATTGTACTGGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGC 732
           228  E  L  Y  W  N  S  Y  N  N  R  R  D  L  N  F  E  R 244

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   G  G  E  T  T  L  K  C  P  V  M  L  V  V  G  D   200
mtk02549   553 GAGGTGGTGAGACGACCCTCAAGTGCCCTGTGATGCTGGTGGTTGGAGAC 602
               | || ||||| |  ||||||| ||| ||||||||||||||||| ||||||
hh03309a   733 GTGGAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGAC 782
           245   G  G  D  I  T  L  R  C  P  V  M  L  V  V  G  D   260

           601 ----+----*----+----*----+----*----+----*----+----* 650
           201 Q  A  P  H  E  D  A  V  V  E  C  N  S  K  L  D  P  217
mtk02549   603 CAAGCACCTCATGAAGATGCCGTGGTGGAATGTAACTCAAAGCTGGACCC 652
               |||||||||||||||||||| |||||||||||||||||||| ||||||||
hh03309a   783 CAAGCACCTCATGAAGATGCAGTGGTGGAATGTAACTCAAAACTGGACCC 832
           261 Q  A  P  H  E  D  A  V  V  E  C  N  S  K  L  D  P  277

           651 ----+----*----+----*----+----*----+----*----+----* 700
           218  T  Q  T  S  F  L  K  M  A  D  S  G  G  Q  P  Q  L 234
mtk02549   653 CACACAGACCTCGTTCCTCAAGATGGCCGACTCTGGAGGTCAGCCACAGC 702
               ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||
hh03309a   833 CACCCAGACCTCGTTCCTCAAGATGGCTGACTCCGGAGGTCAGCCCCAGC 882
           278  T  Q  T  S  F  L  K  M  A  D  S  G  G  Q  P  Q  L 294

           701 ----+----*----+----*----+----*----+----*----+----* 750
           235   T  Q  P  G  K  L  T  E  A  F  K  Y  F  L  Q  G   250
mtk02549   703 TGACTCAGCCCGGCAAGCTGACAGAGGCTTTCAAGTACTTCCTGCAAGGC 752
               |||||||||| ||||||||||| ||||| |||||||||||||||||||||
hh03309a   883 TGACTCAGCCAGGCAAGCTGACCGAGGCCTTCAAGTACTTCCTGCAAGGC 932
           295   T  Q  P  G  K  L  T  E  A  F  K  Y  F  L  Q  G   310

           751 ----+----*----+----*----+----*----+----*----+----* 800
           251 M  G  Y  M  A  S  S  C  M  T  R  L  S  R  S  R  T  267
mtk02549   753 ATGGGCTACATGGCCTCTTCCTGCATGACTCGCCTATCTCGGTCTCGCAC 802
               ||||||||||||||||| ||||||||||||||||| || |||||||| ||
hh03309a   933 ATGGGCTACATGGCCTCATCCTGCATGACTCGCCTGTCCCGGTCTCGTAC 982
           311 M  G  Y  M  A  S  S  C  M  T  R  L  S  R  S  R  T  327

           801 ----+----*----+----*----+----*----+----*----+----* 850
           268  A  S  L  T  S  A  A  S  I  D  G  S  R  S  R  S  R 284
mtk02549   803 AGCATCTCTGACCAGTGCAGCATCCATCGATGGCAGTCGGTCCCGATCCC 852
               ||| ||||||||||||||||||||| | |||||||  |||||||| || |
hh03309a   983 AGCCTCTCTGACCAGTGCAGCATCCGTTGATGGCAACCGGTCCCGCTCTC 1032
           328  A  S  L  T  S  A  A  S  V  D  G  N  R  S  R  S  R 344

           851 ----+----*----+----*----+----*----+----*----+----* 900
           285   T  L  S  Q  S  S  E  S  G  T  L  P  S  G  P  P   300
mtk02549   853 GCACCCTGTCGCAGAGTAGCGAGTCTGGGACTCTCCCTTCTGGACCCCCA 902
               |||||||||| ||||| ||||||||||| |||||  |||| || ||||| 
hh03309a  1033 GCACCCTGTCCCAGAGCAGCGAGTCTGGAACTCTTTCTTCGGGGCCCCCG 1082
           345   T  L  S  Q  S  S  E  S  G  T  L  S  S  G  P  P   360

           901 ----+----*----+----*----+-- 927
           301 G  H  T  M  E  V  S  C  *   309
mtk02549   903 GGGCACACCATGGAAGTCTCCTGTTGA 929
               |||||||||||||| ||||||||||||
hh03309a  1083 GGGCACACCATGGAGGTCTCCTGTTGA 1109
           361 G  H  T  M  E  V  S  C  *   369


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mtk02549   930 ATGACCCTCATTGCCTTGGTGTGGATCCCAGCCCTCACCTCCTGCAACAC 979
               ||| ||||  ||||| | | ||||  ||||||||||||||||  ||   |
hh03309a  1110 ATGGCCCTTGTTGCCCTAGAGTGGGACCCAGCCCTCACCTCCCCCAGAGC 1159

            51 ----+----*----+----*----+----*----+----*----+----* 100
mtk02549   980 TAATTTAAGAGGTGTTATCAGGGCACTGGGCCAGAGTAAGCAA.GGAAAA 1028
               |||  |  |||||| |    ||||| |||||||  |||||||| ||||||
hh03309a  1160 TAACCTGGGAGGTGCTGAAGGGGCATTGGGCCACCGTAAGCAAGGGAAAA 1209

           101 ----+----*----+----*----+----*----+----*----+----* 150
mtk02549  1029 TGGGCAGATTGTGCAGGGAGATGACCTTGATCTTTAATTGCTACCCTAAC 1078
                ||||||||  ||| |||||||||||||||||||| ||||||||||||||
hh03309a  1210 AGGGCAGATCATGCGGGGAGATGACCTTGATCTTTGATTGCTACCCTAAC 1259

           151 ----+----*----+----*----+----*----+----*----+----* 200
mtk02549  1079 CTTGACCTTTAACCTGTGATATCCTCTAGCTCCTAGGTGAGGTGTCCTAA 1128
               |||||||||||||| |||||  || | ||||||| |  ||| ||||||||
hh03309a  1260 CTTGACCTTTAACCCGTGATTCCCCCCAGCTCCTGGAAGAGATGTCCTAA 1309

           201 ----+----*----+----*----+----*----+----*----+----* 250
mtk02549  1129 TATCTCTTAGAGATCTGGGCCCCCTAAATTACCCCCTCTTCCATTTTGGT 1178
               |||||||||| || |  | ||||  || |  || ||||  ||||||||||
hh03309a  1310 TATCTCTTAGGGACCCAGACCCCTAAATTCTCCTCCTCCCCCATTTTGGT 1359

           251 ----+----*----+----*----+----*----+----*----+----* 300
mtk02549  1179 GTT......GAGAAGGCTTGTATGTTCTCT.CCCTGACCTAGGT.TCTAT 1220
               |||      |||| ||| | |   | ||||  ||||| |||||| |||||
hh03309a  1360 GTTAAGGTGGAGAGGGCATATGCATCCTCTGTCCTGATCTAGGTGTCTAT 1409

           301 ----+----*----+----*----+----*----+----*----+----* 350
mtk02549  1221 AGATGAGGAACAATGAGCTGTTCTAGCTGACACGGGGCCTCCATC..ACT 1268
               || |||||   ||   | |||| ||| || |  || |||||||||  |||
hh03309a  1410 AGCTGAGGGGTAAGAGGTTGTTGTAGTTGTCCTGGTGCCTCCATCAGACT 1459

           351 ----+----*----+----*----+----*----+----*----+----* 400
mtk02549  1269 CCCCCTCTTTAGCCCATATTTGCAAGGGTAGGAGAGAGAGTGTGTGTGTG 1318
               | ||||  ||  |||||||||||||||| ||| ||               
hh03309a  1460 CTCCCTACTTGTCCCATATTTGCAAGGGGAGGGGA............... 1494

           401 ----+----*----+----*----+----*----+----*----+----* 450
mtk02549  1319 TTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGATGGTGAGAGATGGGGAGC 1368
                                                  |  | |   |||   
hh03309a  1495 ...................................TTTGGGGCTGGGGCT 1509

           451 ----+----*----+----*----+----*----+----*----+----* 500
mtk02549  1369 TCCTTCCCCAAAGCTGACAGTGGCTTTGCCTTGATGTGTCAGGCCTCTCT 1418
                | ||| ||||||||||  |||||||  | || |    | |||   ||||
hh03309a  1510 CCATTCACCAAAGCTGA.GGTGGCTTCTCATTAACCCTTTAGG..ACTCT 1556

           501 ----+----*----+----*----+----*----+----*----+----* 550
mtk02549  1419 GAAGGCAATAGTCCCAAATGAATGTTTATCAGGAGAAGGTTTGCTGGTGG 1468
               |||||  || | || |  ||||||| | ||||| | ||  ||||||||||
hh03309a  1557 GAAGGGTATGGACCTACGTGAATGTGTGTCAGGGGGAGACTTGCTGGTGG 1606

           551 ----+----*----+----*----+----*----+----*----+----* 600
mtk02549  1469 GTCAGTGATCCTTA..ATGTGATAGAAATATCCAGCATGTAAAAAGAAA. 1515
               || |||| |||| |  |||||||||||| ||||||  ||||||||| || 
hh03309a  1607 GTTAGTGGTCCTCAGGATGTGATAGAAACATCCAG..TGTAAAAAGGAAG 1654

           601 ----+----*----+----*----+----*----+----*----+----* 650
mtk02549  1516 ...GGATGGGAGATGGTGGCCCGTGAAGAACAGTGGTAAACACATTGAAG 1562
                  | ||||||| ||| || | |||||  |  ||||  ||   ||||  |
hh03309a  1655 TTGGAATGGGAGTTGGCGGGCAGTGAACGAGTGTGGGGAA.GGATTGGTG 1703

           651 ----+----*----+----*----+----*----+----*----+----* 700
mtk02549  1563 CTGGGGTAGAAGGGAGGGGCCCGGGTCC.TTTGGCCACACTAACTTGGAT 1611
               |||||| |  ||| ||||||| ||| || ||||||  ||||||||| | |
hh03309a  1704 CTGGGGCAACAGGAAGGGGCCTGGGGCCGTTTGGCTGCACTAACTTTGGT 1753

           701 ----+----*----+----*----+----*----+----*----+----* 750
mtk02549  1612 AGCTGTCAGCGTGCACCTAAAGTGGGACT....AAGGGAAAGAGCTTAGG 1657
               |||  |||| ||||| ||| |||||||||    | ||     ||||| ||
hh03309a  1754 AGC..TCAGTGTGCATCTAGAGTGGGACTGGGGAGGGAGCTAAGCTTGGG 1801

           751 ----+----*----+----*----+----*----+----*----+----* 800
mtk02549  1658 TCCGACTGCTTGGGGCTTGGCATCAGGGTGGGAAGAGCTA.CCTCAGGCT 1706
                  | |||||||||||||||||| ||||||| ||| |||| |||  ||||
hh03309a  1802 CTGGGCTGCTTGGGGCTTGGCAT.AGGGTGGAAAGGGCTACCCTGGGGCT 1850

           801 ----+----*----+----*----+----*----+----*----+----* 850
mtk02549  1707 CTGACCATACTGT..GACGTGTAGAGCGTGACCTCCTGTCTCACACAACT 1754
               ||||||| |||||   | |||| ||| ||| ||||| ||||| |||||||
hh03309a  1851 CTGACCACACTGTAGTATGTGTGGAGGGTGCCCTCCCGTCTCCCACAACT 1900

           851 ----+----*----+----*----+----*-- 882
mtk02549  1755 TCTGCTGTGACAATAAACTATAGAGGAAACTG 1786
               |||||| | |||||||||| |||||||| |||
hh03309a  1901 TCTGCTATAACAATAAACTGTAGAGGAATCTG 1932