# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtk02531.fasta.nr -Q ../query/mKIAA0121.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0121, 287 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919702 sequences Expectation_n fit: rho(ln(x))= 5.2086+/-0.000188; mu= 9.7968+/- 0.011 mean_var=79.9389+/-15.322, 0's: 37 Z-trim: 39 B-trim: 303 in 2/62 Lambda= 0.143448 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|50401537|sp|Q80V24.1|VGLL4_MOUSE RecName: Full= ( 287) 1949 412.4 4.7e-113 gi|60551570|gb|AAH91399.1| Vestigial like 4 (Droso ( 287) 1933 409.1 4.7e-112 gi|74201034|dbj|BAE37393.1| unnamed protein produc ( 281) 1756 372.4 4.9e-101 gi|149049710|gb|EDM02164.1| vestigial like 4 (Dros ( 281) 1740 369.1 4.9e-100 gi|148878165|gb|AAI46173.1| VGLL4 protein [Bos tau ( 293) 1480 315.3 7.9e-84 gi|114107725|gb|AAI23006.1| Vestigial like 4 [Xeno ( 291) 1444 307.9 1.4e-81 gi|49118833|gb|AAH73307.1| MGC80705 protein [Xenop ( 291) 1438 306.6 3.3e-81 gi|114107894|gb|AAI23268.1| Vgll4 protein [Xenopus ( 293) 1411 301.1 1.6e-79 gi|224065493|ref|XP_002187401.1| PREDICTED: vestig ( 291) 1353 289.0 6.4e-76 gi|74187431|dbj|BAE36683.1| unnamed protein produc ( 201) 1323 282.7 3.6e-74 gi|46249967|gb|AAH68363.1| Vestigial like 4 (Droso ( 282) 1225 262.5 5.9e-68 gi|88698060|gb|ABD48893.1| vestigial-like 4 [Homo ( 205) 944 204.3 1.5e-50 gi|119584510|gb|EAW64106.1| vestigial like 4 (Dros ( 206) 944 204.3 1.5e-50 gi|119584502|gb|EAW64098.1| vestigial like 4 (Dros ( 210) 944 204.3 1.5e-50 gi|119584509|gb|EAW64105.1| vestigial like 4 (Dros ( 219) 944 204.3 1.6e-50 gi|119584504|gb|EAW64100.1| vestigial like 4 (Dros ( 231) 944 204.3 1.6e-50 gi|12804355|gb|AAH03038.1| VGLL4 protein [Homo sap ( 259) 944 204.4 1.8e-50 gi|68068037|sp|Q14135.4|VGLL4_HUMAN RecName: Full= ( 290) 944 204.4 1.9e-50 gi|119584508|gb|EAW64104.1| vestigial like 4 (Dros ( 290) 944 204.4 1.9e-50 gi|119584503|gb|EAW64099.1| vestigial like 4 (Dros ( 295) 944 204.4 2e-50 gi|119584507|gb|EAW64103.1| vestigial like 4 (Dros ( 296) 944 204.4 2e-50 gi|55726797|emb|CAH90159.1| hypothetical protein [ ( 290) 935 202.5 7.1e-50 gi|109034406|ref|XP_001087506.1| PREDICTED: simila ( 413) 933 202.3 1.2e-49 gi|73984596|ref|XP_859845.1| PREDICTED: similar to ( 210) 926 200.6 2e-49 gi|73984598|ref|XP_859885.1| PREDICTED: similar to ( 259) 926 200.6 2.4e-49 gi|149728277|ref|XP_001492857.1| PREDICTED: simila ( 290) 926 200.7 2.6e-49 gi|73984594|ref|XP_849823.1| PREDICTED: similar to ( 291) 926 200.7 2.6e-49 gi|149728279|ref|XP_001492812.1| PREDICTED: simila ( 296) 926 200.7 2.6e-49 gi|53134544|emb|CAG32341.1| hypothetical protein [ ( 295) 902 195.7 8.1e-48 gi|126336197|ref|XP_001365805.1| PREDICTED: hypoth ( 290) 871 189.3 6.9e-46 gi|126336199|ref|XP_001365860.1| PREDICTED: hypoth ( 296) 871 189.3 7e-46 gi|47229344|emb|CAG04096.1| unnamed protein produc ( 257) 849 184.7 1.5e-44 gi|223647474|gb|ACN10495.1| Transcription cofactor ( 263) 839 182.6 6.3e-44 gi|47229865|emb|CAG07061.1| unnamed protein produc ( 161) 609 134.9 9.3e-30 gi|88698056|gb|ABD48891.1| vestigial-like 4 [Homo ( 63) 416 94.6 4.9e-18 gi|156229010|gb|EDO49807.1| predicted protein [Nem ( 218) 298 70.6 2.8e-10 gi|47229864|emb|CAG07060.1| unnamed protein produc ( 79) 276 65.7 3e-09 gi|209736394|gb|ACI69066.1| Transcription cofactor ( 271) 266 64.1 3.2e-08 gi|47190564|emb|CAG13509.1| unnamed protein produc ( 57) 217 53.4 1.1e-05 gi|120537682|gb|AAI29254.1| Zgc:158499 [Danio reri ( 266) 225 55.6 1.1e-05 gi|198435040|ref|XP_002126513.1| PREDICTED: simila (1235) 221 55.3 6.3e-05 gi|212506288|gb|EEB10548.1| conserved hypothetical ( 235) 204 51.2 0.00021 gi|210115318|gb|EEA63071.1| hypothetical protein B ( 75) 197 49.3 0.00024 gi|215505926|gb|EEC15420.1| conserved hypothetical ( 131) 189 47.9 0.0012 gi|110758894|ref|XP_001122378.1| PREDICTED: simila ( 168) 186 47.3 0.0022 >>gi|50401537|sp|Q80V24.1|VGLL4_MOUSE RecName: Full=Tran (287 aa) initn: 1949 init1: 1949 opt: 1949 Z-score: 2186.0 bits: 412.4 E(): 4.7e-113 Smith-Waterman score: 1949; 100.000% identity (100.000% similar) in 287 aa overlap (1-287:1-287) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK 190 200 210 220 230 240 250 260 270 280 mKIAA0 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS ::::::::::::::::::::::::::::::::::::::::::::::: gi|504 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS 250 260 270 280 >>gi|60551570|gb|AAH91399.1| Vestigial like 4 (Drosophil (287 aa) initn: 1933 init1: 1933 opt: 1933 Z-score: 2168.1 bits: 409.1 E(): 4.7e-112 Smith-Waterman score: 1933; 99.303% identity (99.652% similar) in 287 aa overlap (1-287:1-287) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::::.: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 KRKFSLEHGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK 190 200 210 220 230 240 250 260 270 280 mKIAA0 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS ::::::::::::::::::::::::::::::::::::::::::::::: gi|605 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS 250 260 270 280 >>gi|74201034|dbj|BAE37393.1| unnamed protein product [M (281 aa) initn: 1756 init1: 1756 opt: 1756 Z-score: 1970.2 bits: 372.4 E(): 4.9e-101 Smith-Waterman score: 1756; 100.000% identity (100.000% similar) in 259 aa overlap (29-287:23-281) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :::::::::::::::::::::::::::::::: gi|742 METPLDVLSRAASLVHADDEKREASLRGEPRMQTLPVASALSSHRTGPPPISPS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK 180 190 200 210 220 230 250 260 270 280 mKIAA0 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS ::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS 240 250 260 270 280 >>gi|149049710|gb|EDM02164.1| vestigial like 4 (Drosophi (281 aa) initn: 1740 init1: 1740 opt: 1740 Z-score: 1952.3 bits: 369.1 E(): 4.9e-100 Smith-Waterman score: 1740; 99.228% identity (99.614% similar) in 259 aa overlap (29-287:23-281) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :::::::::::::::::::::::::::::::: gi|149 METPLDVLSRAASLVHADDEKREASLRGEPRMQTLPVASALSSHRTGPPPISPS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::::.: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KRKFSLEHGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LHGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAK 180 190 200 210 220 230 250 260 270 280 mKIAA0 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS ::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS 240 250 260 270 280 >>gi|148878165|gb|AAI46173.1| VGLL4 protein [Bos taurus] (293 aa) initn: 1674 init1: 809 opt: 1480 Z-score: 1661.3 bits: 315.3 E(): 7.9e-84 Smith-Waterman score: 1702; 85.473% identity (93.919% similar) in 296 aa overlap (1-287:1-293) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :::::::::::::::.::::::.:::::::.::::::.:::::::::..::::::::::: gi|148 MLFMKMDLLNYQYLDNMNNNIGILCYEGEAALRGEPRLQTLPVASALTAHRTGPPPISPS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::::..::: ::::..::.:::::::.::::::.:::::.:::::::::::::.::..: gi|148 KRKFSVDPGDDDLDCDGDHASKMSRIFAPHLNKTANGDCRKDPRERSRSPIERAVAPTMS 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 LHGGHLYASLPSL-MEQPLALTKNSSDTGRSA--------VERQQNRPSVITCASAGARN ::.: :::::::: ::::::::::: :.:: : ::::::::::::::::.::: gi|148 LHSGPLYASLPSLSMEQPLALTKNSLDAGRPAGLSPTLAPVERQQNRPSVITCASASARN 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 CNLSHCPIAHSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSIT :::::::.:::::.: : ::::: ::.: :::::::::::::::::::::::::::::: gi|148 CNLSHCPVAHSGCAA-GPASYRRTPSST--CDPVVEEHFRRSLGKNYKEPEPAPNSVSIT 190 200 210 220 230 240 250 260 270 280 mKIAA0 GSVDDHFAKALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS :::::::::::::::::::::::.:::::::::::::::::.:::::::::::::: gi|148 GSVDDHFAKALGDTWLQIKAAKDGASSSPESASRRGQPASPSAHMVSHSHSPSVVS 240 250 260 270 280 290 >>gi|114107725|gb|AAI23006.1| Vestigial like 4 [Xenopus (291 aa) initn: 1447 init1: 751 opt: 1444 Z-score: 1621.0 bits: 307.9 E(): 1.4e-81 Smith-Waterman score: 1444; 72.449% identity (90.476% similar) in 294 aa overlap (1-287:1-291) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS ::::::::::::::::::::::.:::::::.::..::.: ::..:::: ::.::::::: gi|114 MLFMKMDLLNYQYLDKMNNNIGILCYEGEAALRSDPRVQPLPMTSALSIPRTAPPPISPS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::.::. ::..:.:.:::::::::.: :::.:..::: :.. :.::::::::::::..: gi|114 KRKLSMDQGDEELECDNDHVSKMSRMFPPHLTKSLNGDYRKEHRDRSRSPIERAAAPTMS 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRS-----AVERQQNRPSVITCASAGARNCNLS ::..:::. : ..::::::::: :..:: ..::::::::::::: :. :::.:: gi|114 LHASHLYGIPPLAVDQPLALTKNSMDASRSMGIVPTMERQQNRPSVITCAPASNRNCSLS 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 HCPIAHSG--CSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGS :::..::: ..:: :.::: ..:..::::::::::::::::::::::. :::::::: gi|114 HCPVTHSGGVSAVPG--SFRRPSNTTTACDPVVEEHFRRSLGKNYKEPEPVANSVSITGS 190 200 210 220 230 240 250 260 270 280 mKIAA0 VDDHFAKALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS ::::::::::.::::::::::.. ::::::::::: .::.:::..:.:::::.: gi|114 VDDHFAKALGETWLQIKAAKDGGPSSPESASRRGQ-SSPSAHMMNHNHSPSVLS 240 250 260 270 280 290 >>gi|49118833|gb|AAH73307.1| MGC80705 protein [Xenopus l (291 aa) initn: 1461 init1: 736 opt: 1438 Z-score: 1614.3 bits: 306.6 E(): 3.3e-81 Smith-Waterman score: 1438; 70.890% identity (90.411% similar) in 292 aa overlap (1-287:1-291) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS :: .:::::::::: ::::::..:::::::.::..::.:.::..::::.:::.::::::: gi|491 MLCVKMDLLNYQYLHKMNNNIAILCYEGEAALRNDPRVQSLPMSSALSNHRTAPPPISPS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS ::.:::. :: .:.:.:::::::::.: :::.:..::. :.. :.::::::::::::..: gi|491 KRRFSMDQGDDELECDNDHVSKMSRMFPPHLTKSLNGEYRKEHRDRSRSPIERAAAPTMS 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 LHGGHLYASLPSLMEQPLALTKNSSDTGRSA-----VERQQNRPSVITCASAGARNCNLS ::..:::. : :.::::::::: :..:. .::::::::::::: :. :::.:: gi|491 LHASHLYGIPPLAMDQPLALTKNSMDASRNMGIVPPMERQQNRPSVITCAPASNRNCSLS 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 HCPIAHSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVD :::..::::.. ...::: ..:..::::::::::::::::::::::. :::::::::: gi|491 HCPVTHSGCASSVPGNFRRPSNTTTACDPVVEEHFRRSLGKNYKEPEPVANSVSITGSVD 190 200 210 220 230 240 240 250 260 270 280 mKIAA0 DHFAKALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS :::::::::::::::::::.. ::::::::::: .: .:::..:.:::::.: gi|491 DHFAKALGDTWLQIKAAKDGGPSSPESASRRGQ-SSASAHMMNHNHSPSVLS 250 260 270 280 290 >>gi|114107894|gb|AAI23268.1| Vgll4 protein [Xenopus lae (293 aa) initn: 1332 init1: 647 opt: 1411 Z-score: 1584.1 bits: 301.1 E(): 1.6e-79 Smith-Waterman score: 1411; 69.728% identity (89.796% similar) in 294 aa overlap (1-287:1-293) 10 20 30 40 50 mKIAA0 MLFMKMDLLNYQYLDKMNNN-IGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISP :: . ::::::::: .:::: :..:::::::.::..::.: ::..::::.:::.:::::: gi|114 MLALTMDLLNYQYLHNMNNNNIAILCYEGEAALRSDPRVQPLPMSSALSNHRTAPPPISP 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 SKRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAV :::.:::. :: .:.:.:::::::::.:.::..:..::: :.. :.::::::::::::.. gi|114 SKRRFSMDQGDDELECDNDHVSKMSRMFAPHITKSLNGDYRKEHRDRSRSPIERAAAPTM 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 SLHGGHLYASLPSLMEQPLALTKNSSDTGRSA-----VERQQNRPSVITCASAGARNCNL :::..:::. : ..::::::::: :..:: .::::::::::::: :. :::.: gi|114 SLHASHLYGIPPLAVDQPLALTKNSMDASRSMGIVPPMERQQNRPSVITCAPASNRNCSL 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 SHCP-IAHSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGS :::: ..::::.. . ...::: ..:..::::::::::::::::::::::. :::::::: gi|114 SHCPTVTHSGCASAAPGNFRRPSNTTTACDPVVEEHFRRSLGKNYKEPEPVANSVSITGS 190 200 210 220 230 240 240 250 260 270 280 mKIAA0 VDDHFAKALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS :::::::::::::::::::::.. ::::::::::: . :.:::..:.:::::.: gi|114 VDDHFAKALGDTWLQIKAAKDGGPSSPESASRRGQ-SPPSAHMMNHNHSPSVLS 250 260 270 280 290 >>gi|224065493|ref|XP_002187401.1| PREDICTED: vestigial (291 aa) initn: 1038 init1: 486 opt: 1353 Z-score: 1519.3 bits: 289.0 E(): 6.4e-76 Smith-Waterman score: 1553; 79.054% identity (91.892% similar) in 296 aa overlap (1-287:1-291) 10 20 30 40 50 60 mKIAA0 MLFMKMDLLNYQYLDKMNNNIGVLCYEGEASLRGEPRMQTLPVASALSSHRTGPPPISPS ::::.:::::::::::::::::.:::::::.:::::::: : . :::.::::::::::: gi|224 MLFMRMDLLNYQYLDKMNNNIGILCYEGEAALRGEPRMQPLQ-SPALSNHRTGPPPISPS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 KRKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVS :::.::. ::..:::::::::::::.:.:::.::.::: :.. ::::::::::::::..: gi|224 KRKLSMDQGDEELDCENDHVSKMSRMFNPHLTKTANGDYRKEHRERSRSPIERAAAPTMS 60 70 80 90 100 110 130 140 150 160 170 mKIAA0 LHGGHLYASLPSL-MEQPLALTKNSSDTGR--------SAVERQQNRPSVITCASAGARN ::..:.:::.::: ::::::::::: :..: :.::::::::::::::::. :: gi|224 LHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRN 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 CNLSHCPIAHSGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSIT :::::::::::.:: .:.:::: :.::.::::::::::::::::::::::. :::::: gi|224 CNLSHCPIAHSACS---GAAYRRPSSSTAACDPVVEEHFRRSLGKNYKEPEPVANSVSIT 180 190 200 210 220 230 240 250 260 270 280 mKIAA0 GSVDDHFAKALGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS :::::::::::::::::::::::...::::::::::: :::..:::::.:::::.: gi|224 GSVDDHFAKALGDTWLQIKAAKDGVGSSPESASRRGQ-ASPSSHMVSHTHSPSVAS 240 250 260 270 280 290 >>gi|74187431|dbj|BAE36683.1| unnamed protein product [M (201 aa) initn: 1323 init1: 1323 opt: 1323 Z-score: 1487.9 bits: 282.7 E(): 3.6e-74 Smith-Waterman score: 1323; 100.000% identity (100.000% similar) in 196 aa overlap (92-287:6-201) 70 80 90 100 110 120 mKIAA0 RKFSMEPGDKDLDCENDHVSKMSRIFSPHLNKTVNGDCRRDPRERSRSPIERAAAPAVSL :::::::::::::::::::::::::::::: gi|741 MIKVRNKTVNGDCRRDPRERSRSPIERAAAPAVSL 10 20 30 130 140 150 160 170 180 mKIAA0 HGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HGGHLYASLPSLMEQPLALTKNSSDTGRSAVERQQNRPSVITCASAGARNCNLSHCPIAH 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA0 SGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SGCSAPGSASYRRPPSATATCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKA 100 110 120 130 140 150 250 260 270 280 mKIAA0 LGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS :::::::::::::::::::::::::::::::::::::::::::::: gi|741 LGDTWLQIKAAKDSASSSPESASRRGQPASPTAHMVSHSHSPSVVS 160 170 180 190 200 287 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:57:43 2009 done: Thu Mar 12 23:03:17 2009 Total Scan time: 776.310 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]